#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 13, 2024; 13:03 GMT

TreeBASE (cc) 1994-2008

Study reference:
Fewer D., Friedl T., & Budel B. 2002. Chroococcidiopsis and heterocyst differentiating
cyanobacteria are each other's closest living relatives. Molecular Phylogenetics
and Evolution, 23(1): 82-90..

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S851]

BEGIN TAXA;
        TITLE  TaxonLabelSet10826;
        DIMENSIONS NTAX=57;
        TAXLABELS
            Anabaena_PCC7122_AF091150
            Arthrospira_PCC8005_X70769
            Bacillus_subtilis_AB016721
            Calothrix_PCC7102_AF132779
            Chlorogloeopsis_PCC6718_AF132777
            Chlorogloeopsis_PCC7518_X68780
            Chlorolobium_tepidum_M58468
            Chroococcidiopsis_CCMP1489_AJ344556
            Chroococcidiopsis_PCC6712_AJ344557
            Chroococcidiopsis_PCC7203_RDP
            Chroococcidiopsis_SAG2023_AJ344552
            Chroococcidiopsis_SAG2024_AJ344553
            Chroococcidiopsis_SAG2025_AJ344554
            Chroococcidiopsis_SAG2026_AJ344555
            Chroococcidiopsis_SAG3979_AJ344558
            Cyanobium_PCC6307_AF001477
            Cyanophora_PLASTID_U30821
            Cyanothece_PCC7424_AF132932
            Cylindrospermum_ATCC29204_AF132789
            Dermocarpella_SAG2984_AJ344559
            Escherichia_coli_AE000129
            Fischerella_PCC7414_AF132788
            Fischerella_SAG2027_AJ344560
            Gloeobacter_PCC7421_AF132790
            Gloeothece_PCC6501_X78680
            Leptolyngbya_PCC7375_AF132786
            Lyngbya_PCC7419_AJ000714
            Marchantia_PLASTID_X04465
            Microcystis_PCC7941_U40340
            Myxosarcina_PCC7312_AJ344561
            Myxosarcina_PCC7325_AJ344562
            Nodularia_PCC6804_AJ133181
            Nostoc_PCC7120_X59559
            Nostoc_PCC73102_AF027655
            Nostoc_SAG2028_AJ344563
            Oscillatoria_IAMM220_AB003164
            Oscillatoria_IAMM82_AB003168
            Oscillatoria_PCC7515_AF132933
            Phormidium_IAMM221_AB003165
            Pleurocapsa_PCC7516_X78681
            Pleurocapsa_SAG499_AJ344564
            Porphyra_PLASTID_U38804
            Prochlorococcus_MIT9313_AF053398
            Pseudanabaena_PCC6903_AF132778
            Scytonema_PCC7110_AF132781
            Spirulina_IAMM223_AB003166
            Spirulina_PCC6313_X75045
            Stanieria_PCC7437_AF132931
            Synechoccoccus_ATCC700243_AF132772
            Synechoccoccus_ATCC700246_AF132775
            Synechoccoccus_KOBAYASHI_unpublished
            Synechococcus_PCC6301_AF132776
            Synechococcus_PCC7002_D88289
            Synechococcus_WH8101_AF001480
            Synechocystis_PCC6803_D64000
            Trichodesmium_NIBB1067_X70767
            Xenococcus_PCC7305_AF132783
            ;
END;

BEGIN TREES;
      TITLE Tb6180;
      LINK TAXA = TaxonLabelSet10826;
      TREE 'User-defined: Myxosarcina and Chrooco' = [&R] ((Chlorolobium_tepidum_M58468,Escherichia_coli_AE000129),((((((((((Chroococcidiopsis_SAG2023_AJ344552,Chroococcidiopsis_SAG2026_AJ344555),((Chroococcidiopsis_SAG2025_AJ344554,Chroococcidiopsis_PCC7203_RDP),Chroococcidiopsis_SAG2024_AJ344553)),(Myxosarcina_PCC7325_AJ344562,Myxosarcina_PCC7312_AJ344561)),(((((Fischerella_SAG2027_AJ344560,Fischerella_PCC7414_AF132788),(Chlorogloeopsis_PCC6718_AF132777,Chlorogloeopsis_PCC7518_X68780)),((Nostoc_SAG2028_AJ344563,Nostoc_PCC73102_AF027655),((Nostoc_PCC7120_X59559,Cylindrospermum_ATCC29204_AF132789),(Nodularia_PCC6804_AJ133181,Anabaena_PCC7122_AF091150)))),Scytonema_PCC7110_AF132781),Calothrix_PCC7102_AF132779)),((Trichodesmium_NIBB1067_X70767,Oscillatoria_PCC7515_AF132933),(Arthrospira_PCC8005_X70769,Lyngbya_PCC7419_AJ000714))),((((((Pleurocapsa_SAG499_AJ344564,Pleurocapsa_PCC7516_X78681),(Dermocarpella_SAG2984_AJ344559,Chroococcidiopsis_CCMP1489_AJ344556)),(Chroococcidiopsis_PCC6712_AJ344557,Xenococcus_PCC7305_AF132783)),Stanieria_PCC7437_AF132931),((Gloeothece_PCC6501_X78680,Cyanothece_PCC7424_AF132932),Microcystis_PCC7941_U40340)),((Spirulina_IAMM223_AB003166,Spirulina_PCC6313_X75045),((Oscillatoria_IAMM220_AB003164,Synechococcus_PCC7002_D88289),Synechocystis_PCC6803_D64000)))),(((Porphyra_PLASTID_U38804,Marchantia_PLASTID_X04465),Cyanophora_PLASTID_U30821),(Phormidium_IAMM221_AB003165,Pseudanabaena_PCC6903_AF132778))),((Synechoccoccus_KOBAYASHI_unpublished,Synechoccoccus_ATCC700243_AF132772),((Synechococcus_PCC6301_AF132776,(Cyanobium_PCC6307_AF001477,(Synechococcus_WH8101_AF001480,Prochlorococcus_MIT9313_AF053398))),(Oscillatoria_IAMM82_AB003168,Leptolyngbya_PCC7375_AF132786)))),Synechoccoccus_ATCC700246_AF132775),Gloeobacter_PCC7421_AF132790),Bacillus_subtilis_AB016721);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr5679]


END;