#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 19, 2024; 7:00 GMT

TreeBASE (cc) 1994-2008

Study reference:
Skaloud P., Kalina T., Nemjova K., De clerck O., & Leliaert F. 2013. Morphology and
phylogenetic position of the freshwater green microalgae Chlorochytrium (Chlorophyceae)
and Scotinosphaera (Scotinosphaerales, ord. nov., Ulvophyceae). Journal
of Phycology, 49(1): 115–129.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S13318]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=32;
        TAXLABELS
            Acetabularia_acetabulum
            Acrochaete_repens
            Blastophysa_rhizopus
            Bolbocoleon_piliferum
            Bornetella_sphaerica
            Bryopsis_sp
            Chlamydomonas_reinhardtii
            Chlorochytrium
            Cladophora_albida
            Cladophora_coelothrix
            Codium_sp
            Derbesia_sp
            Floydiella_terrestris
            Halimeda_spp
            Halochlorococcum_tenuis
            Helicosporidium_sp
            Ignatius_tetrasporus
            Nephroselmis_olivacea
            Oedogonium_cardiacum
            Oltmannsiellopsis_viridis
            Ostreococcus_tauri
            Parachlorella_kessleri
            Phyllodictyon_orientale
            Prototheca_wickerhamii
            Scenedesmus_obliquus
            Scherffelia_dubia
            Scotinosphaera
            Siphonocladus_tropicus
            Stigeoclonium_helveticum
            Tetraselmis_striata
            Trentepohlia_aurea
            Ulva_intestinalis
            ;
END;

BEGIN TREES;
      TITLE 'Bayesian analysis on the concatenated 10-gene dataset';
      LINK TAXA = Taxa;
      TREE Fig._3 = [&R] (Acetabularia_acetabulum:0.124248,Bornetella_sphaerica:0.123516,((((((((((Acrochaete_repens:0.059324,Ulva_intestinalis:0.060636)1.00:0.03459,Bolbocoleon_piliferum:0.039326)1.00:0.017322,Halochlorococcum_tenuis:0.052516)1.00:0.09738,Scotinosphaera:0.114973)0.65:0.015095,Oltmannsiellopsis_viridis:0.091432)0.67:0.010986,Ignatius_tetrasporus:0.155348)0.67:0.009479,((((Nephroselmis_olivacea:0.125374,Ostreococcus_tauri:0.218786)1.00:0.095382,(Scherffelia_dubia:0.036832,Tetraselmis_striata:0.051198)1.00:0.0777)1.00:0.013248,(Parachlorella_kessleri:0.079631,(Helicosporidium_sp:0.428555,Prototheca_wickerhamii:0.106372)1.00:0.052771)1.00:0.04579)1.00:0.008708,(((Chlamydomonas_reinhardtii:0.076109,Chlorochytrium:0.07606)0.85:0.011051,Scenedesmus_obliquus:0.101215)1.00:0.027784,((Floydiella_terrestris:0.115263,Oedogonium_cardiacum:0.08292)1.00:0.019766,Stigeoclonium_helveticum:0.100392)0.99:0.012366)1.00:0.019002)1.00:0.011106)1.00:0.024287,Trentepohlia_aurea:0.309582)0.96:0.015937,(Blastophysa_rhizopus:0.208799,(Cladophora_albida:0.086221,((Cladophora_coelothrix:0.047159,Siphonocladus_tropicus:0.044123)1.00:0.02242,Phyllodictyon_orientale:0.042499)1.00:0.030125)1.00:0.152997)1.00:0.086829)1.00:0.047307,(((Bryopsis_sp:0.056996,Codium_sp:0.133956)1.00:0.115126,Derbesia_sp:0.121382)0.93:0.042705,Halimeda_spp:0.411612)1.00:0.164291)1.00:0.218128);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr57046]


END;