#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 17, 2024; 11:59 GMT TreeBASE (cc) 1994-2008 Study reference: Lin C. 2012. Development of molecular detection and field investigation for two citrus viroids in Taiwan. European Journal of Plant Pathology, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S13718] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=419; TAXLABELS Citrus_cachexia_viroid 'Citrus cachexia viroid isolate ISA 4-CT-I' 'Citrus cachexia viroid isolate X-701-1' 'Citrus cachexia viroid isolate X-701-2' 'Citrus cachexia viroid isolate X-701-3' 'Citrus cachexia viroid isolate X-701-M' 'Citrus cachexia viroid isolate X-704-1' 'Citrus cachexia viroid isolate X-704-2' 'Citrus cachexia viroid isolate X-704-3' 'Citrus cachexia viroid isolate X-704-M' 'Citrus cachexia viroid isolate X-707-1' 'Citrus cachexia viroid isolate X-707-2' 'Citrus cachexia viroid isolate X-707-3' 'Citrus cachexia viroid isolate X-707-4' 'Citrus cachexia viroid isolate X-707-M' 'Citrus cachexia viroid isolate X-712-1' 'Citrus cachexia viroid isolate X-712-2' 'Citrus cachexia viroid isolate X-712-3' 'Citrus cachexia viroid isolate X-712-M' 'Citrus cachexia viroid isolate X-715-1' 'Citrus cachexia viroid isolate X-715-2' 'Citrus cachexia viroid isolate X-715-M' Citrus_gummy_bark_viroid_strain_cachexia Citrus_viroid_II 'Citrus viroid II isolate CVd II HN-01' 'Citrus viroid II isolate CVd II HN-02' 'Citrus viroid II isolate CVd II HN-03' Citrus_viroid_IIa_sequence Citrus_viroid_IIb_Cachexia_sequence_302 Cucumber_pale_fruit_viroid_CPFV_301 Cucumber_pale_fruit_viroid_CPFV_303 Dapple_peach_fruit_disease_viroid_from_peach_dapple_fruit Dapple_plum_and_peach_fruit_disease_viroid_from_plum_and_peach_dapple_fruits Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP1 Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP2 Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP3 'Genomic RNA of hop stunt viroid type HSV-c 303' 'Genomic RNA of hop stunt viroid type HSV-g 297' Genomic_of_hop_stunt_viroid Grapevine_viroid_Hop_stunt_viroid_297 'Grapevine viroid grapevine isolate SHV-gGV complete genome 296' Hop_Stunt_Viroid_HSV_297 Hop_Stunt_Viroid_HSVd_298 Hop_stunt_viroid 'Hop stunt viroid - citrus complete sequence 303' 'Hop stunt viroid - citrus strain CC-A isolate 1' 'Hop stunt viroid - citrus strain CC-A isolate 2' 'Hop stunt viroid - citrus strain CC-A isolate 3' 'Hop stunt viroid - citrus strain CC-A isolate 4' 'Hop stunt viroid - citrus strain CC-A isolate 5' 'Hop stunt viroid - citrus strain CC-A isolate 6' 'Hop stunt viroid - citrus strain CC-B isolate 1' 'Hop stunt viroid - citrus strain CC-B isolate 2' 'Hop stunt viroid - citrus strain CC-B isolate 3' 'Hop stunt viroid - citrus strain CC-B isolate 4' 'Hop stunt viroid - citrus strain CC-B isolate 5' 'Hop stunt viroid - citrus strain CC-B isolate 6' 'Hop stunt viroid - citrus strain CC-C isolate 1' 'Hop stunt viroid - citrus strain CC-C isolate 2' 'Hop stunt viroid - citrus strain CC-C isolate 3' 'Hop stunt viroid - citrus strain CC-C isolate 4' 'Hop stunt viroid - citrus strain CC-C isolate 5' 'Hop stunt viroid - citrus strain CC-C isolate 6' 'Hop stunt viroid - citrus strain CC-D isolate 1' 'Hop stunt viroid - citrus strain CC-D isolate 2' 'Hop stunt viroid - citrus strain CC-D isolate 3' 'Hop stunt viroid - citrus strain CC-D isolate 4' 'Hop stunt viroid - citrus strain CC-D isolate 5' 'Hop stunt viroid - citrus strain CC-D isolate 6' 'Hop stunt viroid - citrus strain CC-E isolate 1' 'Hop stunt viroid - citrus strain CC-E isolate 2' 'Hop stunt viroid - citrus strain CC-E isolate 3' 'Hop stunt viroid - citrus strain CC-E isolate 4' 'Hop stunt viroid - citrus strain CC-E isolate 5' 'Hop stunt viroid - citrus strain CC-E isolate 6' 'Hop stunt viroid - citrus strain CC-F isolate 1' 'Hop stunt viroid - citrus strain CC-F isolate 2' 'Hop stunt viroid - citrus strain CC-F isolate 3' 'Hop stunt viroid - citrus strain CC-F isolate 4' 'Hop stunt viroid - citrus strain CC-F isolate 5' 'Hop stunt viroid - citrus strain CC-F isolate 6' 'Hop stunt viroid - citrus strain CC-G isolate 1' 'Hop stunt viroid - citrus strain CC-G isolate 2' 'Hop stunt viroid - citrus strain CC-G isolate 3' 'Hop stunt viroid - citrus strain CC-G isolate 4' 'Hop stunt viroid - citrus strain CC-G isolate 5' 'Hop stunt viroid - citrus strain CC-G isolate 6' 'Hop stunt viroid - citrus strain CC-H isolate 1' 'Hop stunt viroid - citrus strain CC-H isolate 2' 'Hop stunt viroid - citrus strain CC-H isolate 3' 'Hop stunt viroid - citrus strain CC-H isolate 4' 'Hop stunt viroid - citrus strain CC-H isolate 5' Hop_stunt_viroid_German_grapevine_cultivar_Riesling_genome_298 Hop_stunt_viroid_HSV_Korean_strain_mRNA_for_viroid_297 Hop_stunt_viroid_HSVd Hop_stunt_viroid_HSVd_isolate_genome_from_grapefruit_299 'Hop stunt viroid RNA complete genome isolate hAIw36-5 296' 'Hop stunt viroid RNA complete genome isolate hKF82-4 297' 'Hop stunt viroid citrus isolate HSV-cit variant 1 302' 'Hop stunt viroid citrus isolate HSV-cit variant 2 302' 'Hop stunt viroid clone 10HSVd2-6' 'Hop stunt viroid clone 11HSVd2-5' 'Hop stunt viroid clone 11HSVd2-7' 'Hop stunt viroid clone 11R-HSVd' 'Hop stunt viroid clone 15R-HSV' 'Hop stunt viroid clone 16F-HSV' 'Hop stunt viroid clone 17F-HSVd' 'Hop stunt viroid clone 1R-HSVd' 'Hop stunt viroid clone 1aHSVd11-1' 'Hop stunt viroid clone 1aHSVd11-2' 'Hop stunt viroid clone 1aHSVd11-3' 'Hop stunt viroid clone 2hsvdh2-1' 'Hop stunt viroid clone 2hsvdh2-2' 'Hop stunt viroid clone 2hsvdh2-3' 'Hop stunt viroid clone 2hsvdh2-4' 'Hop stunt viroid clone 2hsvdh2-6' 'Hop stunt viroid clone 2hsvdh2-7' 'Hop stunt viroid clone 31HSVd2-1' 'Hop stunt viroid clone 31HSVd2-2' 'Hop stunt viroid clone 3HSVd2-11' 'Hop stunt viroid clone 3HSVd2-14' 'Hop stunt viroid clone 3HSVd2-3' 'Hop stunt viroid clone 3R-HSV' 'Hop stunt viroid clone 3hsvdh3-4' 'Hop stunt viroid clone 3hsvdh3-5' 'Hop stunt viroid clone 48HSVd2-12' 'Hop stunt viroid clone 4F-HSV' 'Hop stunt viroid clone 4HSVd2-2' 'Hop stunt viroid clone 4aHSVd11-2' 'Hop stunt viroid clone 4aHSVd11-5' 'Hop stunt viroid clone 4aHSVd11-6' 'Hop stunt viroid clone 5 hsvdp11-1' 'Hop stunt viroid clone 5 hsvdp11-2' 'Hop stunt viroid clone 5F-HSV' 'Hop stunt viroid clone 5HSVd2-9' 'Hop stunt viroid clone 5aHSVd11-1' 'Hop stunt viroid clone 5aHSVd11-2' 'Hop stunt viroid clone 5hsvdh5-1' 'Hop stunt viroid clone 5hsvdh5-2' 'Hop stunt viroid clone 5hsvdh5-3' 'Hop stunt viroid clone 62HSVd2-4' 'Hop stunt viroid clone 67HSVd 2-8' 'Hop stunt viroid clone 67HSVd2-1' 'Hop stunt viroid clone 67HSVd2-3' 'Hop stunt viroid clone 67HSVd2-6' 'Hop stunt viroid clone 6aHSVd11-1' 'Hop stunt viroid clone 6aHSVd11-2' 'Hop stunt viroid clone 6aHSVd11-4' 'Hop stunt viroid clone 6aHSVd11-5' 'Hop stunt viroid clone 7HSVd2-2' 'Hop stunt viroid clone 7HSVd2-4' Hop_stunt_viroid_clone_8153 Hop_stunt_viroid_clone_8164 'Hop stunt viroid clone A2-2-1' 'Hop stunt viroid clone A2-2-5' 'Hop stunt viroid clone A35-2-1' 'Hop stunt viroid clone A35-2-3' 'Hop stunt viroid clone A35-2-4' 'Hop stunt viroid clone A35-2-5' Hop_stunt_viroid_clone_B1B Hop_stunt_viroid_clone_B6B Hop_stunt_viroid_clone_BA1B Hop_stunt_viroid_clone_BA4A_and_BA7B Hop_stunt_viroid_clone_Demetra Hop_stunt_viroid_clone_HSVd Hop_stunt_viroid_clone_HSVd_2 Hop_stunt_viroid_clone_HSVd1 Hop_stunt_viroid_clone_HSVd12 Hop_stunt_viroid_clone_HSVd2 Hop_stunt_viroid_clone_HSVd22 Hop_stunt_viroid_clone_HSVd3 'Hop stunt viroid clone He HSVd2-1' 'Hop stunt viroid clone He HSVd2-2' 'Hop stunt viroid clone He HSVd2-6' Hop_stunt_viroid_clone_JC1_and_JC5 Hop_stunt_viroid_clone_JJ1_and_JJ4 Hop_stunt_viroid_clone_JJ3 Hop_stunt_viroid_clone_Jena 'Hop stunt viroid clone Jx-C1-1' Hop_stunt_viroid_clone_Konstantinos 'Hop stunt viroid clone L5HSVdP11-1' 'Hop stunt viroid clone L5HSVdP11-10' Hop_stunt_viroid_clone_PR1A Hop_stunt_viroid_clone_PR1B Hop_stunt_viroid_clone_PR2A Hop_stunt_viroid_clone_Paiko Hop_stunt_viroid_clone_Pinovo 'Hop stunt viroid clone Tu HSVd 1-13' 'Hop stunt viroid clone Tu HSVd 1-16' 'Hop stunt viroid clone Tu HSVd 2-7' Hop_stunt_viroid_clone_Voras 'Hop stunt viroid clone X5HSVd11-1' 'Hop stunt viroid clone X5HSVd11-2' 'Hop stunt viroid clone X5HSVd11-4' Hop_stunt_viroid_clone_alm1261 Hop_stunt_viroid_clone_alm426 Hop_stunt_viroid_clone_cl2 Hop_stunt_viroid_clone_cl3 Hop_stunt_viroid_clone_cl4 Hop_stunt_viroid_clone_hsvd_J1 Hop_stunt_viroid_clone_hsvd_J10 Hop_stunt_viroid_clone_hsvd_J11 Hop_stunt_viroid_clone_hsvd_J12 Hop_stunt_viroid_clone_hsvd_J13 Hop_stunt_viroid_clone_hsvd_J2 Hop_stunt_viroid_clone_hsvd_J3 Hop_stunt_viroid_clone_hsvd_J4 Hop_stunt_viroid_clone_hsvd_J5 Hop_stunt_viroid_clone_hsvd_J6 Hop_stunt_viroid_clone_hsvd_J7 Hop_stunt_viroid_clone_hsvd_J8 Hop_stunt_viroid_clone_hsvd_J9 'Hop stunt viroid clone lz16 hsvdp11-1' 'Hop stunt viroid clone lz16 hsvdp11-6' 'Hop stunt viroid clone lz16 hsvdp11-7' 'Hop stunt viroid clone lz16 hsvdp11-8' 'Hop stunt viroid clone lz16 hsvdp11-9' 'Hop stunt viroid clone lz21 hsvdp11-14' 'Hop stunt viroid clone lz21 hsvdp11-24' 'Hop stunt viroid clone lz21 hsvdp11-6' 'Hop stunt viroid clone lz21 hsvdp11-7' 'Hop stunt viroid clone lz21 hsvdp11-9' 'Hop stunt viroid clone lz6 hsvdp11-5' 'Hop stunt viroid clone lz6 hsvdp11-6' 'Hop stunt viroid clone lz6 hsvdp11-8' 'Hop stunt viroid clone lz6 hsvdp11-9' 'Hop stunt viroid clone t19HSVd11-5' 'Hop stunt viroid clone t19HSVd11-6' 'Hop stunt viroid clone t42HSVd11-5' 'Hop stunt viroid clone t48HSVd11-1' 'Hop stunt viroid clone t48HSVd11-2' 'Hop stunt viroid clone t48HSVd11-4' 'Hop stunt viroid clone tz18HSVd11-1' 'Hop stunt viroid clone tz18HSVd11-3' 'Hop stunt viroid clone tz6HSVd11-4' 'Hop stunt viroid clone tz6HSVd11-5' 'Hop stunt viroid clone xz17 hsvdp11-2' 'Hop stunt viroid clone xz17 hsvdp11-3' 'Hop stunt viroid clonechi100Y-02-4-2 296' 'Hop stunt viroid clonechi100Y-02-4-4 296' 'Hop stunt viroid clonechi100Y-02-4-5 297' 'Hop stunt viroid clonechi100Y-03-2-6 296' 'Hop stunt viroid clonechi100Y-03-2-7 300' 'Hop stunt viroid clonechi100Y-03-2-8 296' Hop_stunt_viroid_grapevine_variant_IIa_sequence Hop_stunt_viroid_grapevine_variant_Ia_sequence Hop_stunt_viroid_grapevine_variant_Ib_sequence Hop_stunt_viroid_grapevine_variant_Ic_sequence Hop_stunt_viroid_grapevine_variant_Id_sequence Hop_stunt_viroid_grapevine_variant_Ie_sequence 'Hop stunt viroid isolate 09-2009-2140hs' 'Hop stunt viroid isolate 09-2009-854' 'Hop stunt viroid isolate 26X-l11m' 'Hop stunt viroid isolate 26X-l12' 'Hop stunt viroid isolate 26X-l33' 'Hop stunt viroid isolate 26x-c11' 'Hop stunt viroid isolate 26x-c33' 'Hop stunt viroid isolate 26x-l22m' 'Hop stunt viroid isolate 26x-l28' 'Hop stunt viroid isolate 26x-l4' Hop_stunt_viroid_isolate_391a Hop_stunt_viroid_isolate_570 Hop_stunt_viroid_isolate_580 Hop_stunt_viroid_isolate_676 'Hop stunt viroid isolate Aridaia-570' Hop_stunt_viroid_isolate_CA909 Hop_stunt_viroid_isolate_CQ_clone_1 Hop_stunt_viroid_isolate_CQ_clone_2 Hop_stunt_viroid_isolate_CQ_clone_3 'Hop stunt viroid isolate CVd-IIa 117' 'Hop stunt viroid isolate CVd-IIa or E819' 'Hop stunt viroid isolate CVd-IIb or Ca902' 'Hop stunt viroid isolate CVd-IIc or Ca905' Hop_stunt_viroid_isolate_CVdIIA_10uy Hop_stunt_viroid_isolate_CVdIIA_11uy Hop_stunt_viroid_isolate_CVdIIa_17uy 'Hop stunt viroid isolate CVdIIa 205-2-1' 'Hop stunt viroid isolate CVdIIa 205-2-4' 'Hop stunt viroid isolate CVdIIa 54-2-1' 'Hop stunt viroid isolate CVdIIa 54-2-2' Hop_stunt_viroid_isolate_Ca903 'Hop stunt viroid isolate GZ-1' Hop_stunt_viroid_isolate_H1 Hop_stunt_viroid_isolate_HCSC01 Hop_stunt_viroid_isolate_HCSC08 Hop_stunt_viroid_isolate_HCSC10 Hop_stunt_viroid_isolate_HNiagD08 Hop_stunt_viroid_isolate_HSVd 'Hop stunt viroid isolate HSVd-IIa 815-11' 'Hop stunt viroid isolate HSVd-IIa 815-3an' 'Hop stunt viroid isolate HSVd-IIa 816-8' 'Hop stunt viroid isolate HSVd-IIa 817' 'Hop stunt viroid isolate HSVd-IIb 814-1' 'Hop stunt viroid isolate HSVd-IIc 816-7' 'Hop stunt viroid isolate HSVd-gb' Hop_stunt_viroid_isolate_HSVd10 Hop_stunt_viroid_isolate_HSVd11 Hop_stunt_viroid_isolate_HSVd12 Hop_stunt_viroid_isolate_HSVd13 Hop_stunt_viroid_isolate_HSVd14 Hop_stunt_viroid_isolate_HSVd15 Hop_stunt_viroid_isolate_HSVd16 Hop_stunt_viroid_isolate_HSVd17 Hop_stunt_viroid_isolate_HSVd2 Hop_stunt_viroid_isolate_HSVd22 Hop_stunt_viroid_isolate_HSVd3 Hop_stunt_viroid_isolate_HSVd32 Hop_stunt_viroid_isolate_HSVd4 Hop_stunt_viroid_isolate_HSVd42 Hop_stunt_viroid_isolate_HSVd5 Hop_stunt_viroid_isolate_HSVd52 Hop_stunt_viroid_isolate_HSVd6 Hop_stunt_viroid_isolate_HSVd62 Hop_stunt_viroid_isolate_HSVd7 Hop_stunt_viroid_isolate_HSVd72 Hop_stunt_viroid_isolate_HSVd8 Hop_stunt_viroid_isolate_HSVd9 Hop_stunt_viroid_isolate_HSVdE117 Hop_stunt_viroid_isolate_IIaI14 Hop_stunt_viroid_isolate_IIaI22 Hop_stunt_viroid_isolate_IIaI3 Hop_stunt_viroid_isolate_IIaI4 Hop_stunt_viroid_isolate_IIaS1S3 Hop_stunt_viroid_isolate_IIaS1S3_HSVd Hop_stunt_viroid_isolate_IIaS4 Hop_stunt_viroid_isolate_IIbI1 Hop_stunt_viroid_isolate_IIbI13 Hop_stunt_viroid_isolate_IIbI2_ Hop_stunt_viroid_isolate_IIbS2 Hop_stunt_viroid_isolate_IIcI4 Hop_stunt_viroid_isolate_IIcI914 Hop_stunt_viroid_isolate_IIcS1 'Hop stunt viroid isolate ISA 5-CT-I' 'Hop stunt viroid isolate ISA 6-SR-I' 'Hop stunt viroid isolate ISA 7-RC-I' Hop_stunt_viroid_isolate_Jabong 'Hop stunt viroid isolate Kernitsa-327' Hop_stunt_viroid_isolate_LMSX2 Hop_stunt_viroid_isolate_Mor17 Hop_stunt_viroid_isolate_Mor24 Hop_stunt_viroid_isolate_Mor4 Hop_stunt_viroid_isolate_Mor61 Hop_stunt_viroid_isolate_Mor9 'Hop stunt viroid isolate PM-26X clone 26x-p26' 'Hop stunt viroid isolate PM-26X clone 26x-p3' 'Hop stunt viroid isolate PM-26X clone 26x-p35' 'Hop stunt viroid isolate PM-26X clone 26x-p44' 'Hop stunt viroid isolate PM-26x clone 26x-c13' 'Hop stunt viroid isolate PM-26x clone 26x-c18' 'Hop stunt viroid isolate PM-26x clone 26x-c19' 'Hop stunt viroid isolate PM-26x clone 26x-c2' 'Hop stunt viroid isolate PM-26x clone 26x-c22' 'Hop stunt viroid isolate PM-26x clone 26x-c23' 'Hop stunt viroid isolate PM-26x clone 26x-c26' 'Hop stunt viroid isolate PM-26x clone 26x-c29' 'Hop stunt viroid isolate PM-26x clone 26x-c45' Hop_stunt_viroid_isolate_Roma1 Hop_stunt_viroid_isolate_Rouge_de_Rousillon_D08 Hop_stunt_viroid_isolate_SC_clone_1 Hop_stunt_viroid_isolate_SC_clone_2 Hop_stunt_viroid_isolate_SC_clone_3 Hop_stunt_viroid_isolate_Tahiti_lime_1 Hop_stunt_viroid_isolate_Tahiti_lime_11 Hop_stunt_viroid_isolate_Tahiti_lime_2 Hop_stunt_viroid_isolate_Tahiti_lime_3 Hop_stunt_viroid_isolate_Tahiti_lime_4 Hop_stunt_viroid_isolate_Tahiti_lime_5 Hop_stunt_viroid_isolate_Tahiti_lime_6 Hop_stunt_viroid_isolate_Tahiti_lime_7 Hop_stunt_viroid_isolate_Tahiti_lime_8 Hop_stunt_viroid_isolate_Thailand Hop_stunt_viroid_isolate_UMCX1 Hop_stunt_viroid_isolate_Whang Hop_stunt_viroid_isolate_apricot_Ring_Pox 'Hop stunt viroid isolate cl-c19' 'Hop stunt viroid isolate cl-c25' 'Hop stunt viroid isolate cl-c3' 'Hop stunt viroid isolate cl-c37' 'Hop stunt viroid isolate cl-c51' Hop_stunt_viroid_isolate_dapple_plum_fruit Hop_stunt_viroid_isolate_e Hop_stunt_viroid_isolate_f Hop_stunt_viroid_isolate_hAIw36 Hop_stunt_viroid_isolate_hAIw5 Hop_stunt_viroid_isolate_hFK82 Hop_stunt_viroid_isolate_hKFKi Hop_stunt_viroid_isolate_hKIw Hop_stunt_viroid_isolate_hSIw 'Hop stunt viroid isolate sh-ay-01' Hop_stunt_viroid_isolate_soR2 Hop_stunt_viroid_isolate_soV1 Hop_stunt_viroid_isolate_soWn3 Hop_stunt_viroid_sequence_almond_isolate_HSVd Hop_stunt_viroid_sequence_almond_isolate_HSVd2 Hop_stunt_viroid_strain_citrus_yellow_corky_vein_viroid_A Hop_stunt_viroid_strain_split_bark Hop_stunt_viroid_strain_yellow_corky_vein Hop_stunt_viroid_strain_yellow_corky_vein2 'Hop stunt viroid variant 10SA1-IW1 302' 'Hop stunt viroid variant 10SA1-IW2 301' Hop_stunt_viroid_variant_AB2 Hop_stunt_viroid_variant_AD1 Hop_stunt_viroid_variant_AD2 Hop_stunt_viroid_variant_BF Hop_stunt_viroid_variant_E120P8 Hop_stunt_viroid_variant_E127 Hop_stunt_viroid_variant_E180 Hop_stunt_viroid_variant_EX1 Hop_stunt_viroid_variant_FA Hop_stunt_viroid_variant_FO Hop_stunt_viroid_variant_KS14 Hop_stunt_viroid_variant_MA Hop_stunt_viroid_variant_MK Hop_stunt_viroid_variant_WP Hop_stunt_viroid_variant_WS1 Hop_stunt_viroid_variant_WS2 Hop_stunt_viroid2 Hop_stunt_viroidHSV_sequence_297 hop_stunt_viroid_isolate_IIsc2 ; END; BEGIN TREES; TITLE HSVd; LINK TAXA = Taxa; TREE PAUP_1 = [&R] (((Hop_stunt_viroid_isolate_IIbI1:0.01957334,Hop_stunt_viroid_variant_WS2:1.0E-8):0.02594137,(Hop_stunt_viroid_variant_KS14:1.0E-8,('Hop stunt viroid isolate HSVd-IIc 816-7':1.0E-8,('Hop stunt viroid isolate CVd-IIc or Ca905':1.0E-8,(Hop_stunt_viroid_strain_yellow_corky_vein:1.0E-8,(Hop_stunt_viroid_strain_citrus_yellow_corky_vein_viroid_A:1.0E-8,(Hop_stunt_viroid_isolate_IIcI4:1.0E-8,('Hop stunt viroid - citrus strain CC-F isolate 2':1.0E-8,(Hop_stunt_viroid:1.0E-8,('Hop stunt viroid isolate PM-26X clone 26x-p26':0.00669542,(Hop_stunt_viroid_isolate_IIcS1:0.00658682,('Hop stunt viroid isolate PM-26x clone 26x-c45':0.00661251,(Hop_stunt_viroid_clone_HSVd22:1.0E-8,(Hop_stunt_viroid_variant_AD2:1.0E-8,(Hop_stunt_viroid_isolate_Tahiti_lime_7:1.0E-8,(hop_stunt_viroid_isolate_IIsc2:1.0E-8,('Hop stunt viroid clone Jx-C1-1':1.0E-8,(Hop_stunt_viroid_isolate_IIcI914:1.0E-8,('Hop stunt viroid - citrus strain CC-G isolate 1':1.0E-8,('Hop stunt viroid isolate PM-26X clone 26x-p35':1.0E-8,('Hop stunt viroid isolate PM-26x clone 26x-c2':1.0E-8,('Hop stunt viroid isolate PM-26x clone 26x-c29':0.00660545,('Hop stunt viroid isolate PM-26x clone 26x-c23':0.00659861,('Hop stunt viroid isolate PM-26x clone 26x-c13':0.00659897,('Hop stunt viroid isolate PM-26x clone 26x-c22':0.00659899,('Hop stunt viroid isolate PM-26x clone 26x-c19':1.0E-8,(('Hop stunt viroid isolate 26X-l11m':1.0E-8,'Hop stunt viroid isolate 26X-l12':1.0E-8):0.00659674,(('Hop stunt viroid isolate 26x-l4':1.0E-8,'Hop stunt viroid isolate PM-26X clone 26x-p44':1.9007E-4):0.00638438,('Citrus cachexia viroid isolate X-707-M':1.0E-8,(Hop_stunt_viroid_variant_AB2:1.0E-8,('Citrus cachexia viroid isolate X-707-1':0.00645878,('Citrus cachexia viroid isolate X-707-2':0.0064587,'Citrus cachexia viroid isolate X-707-4':0.00645773):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00643795):1.0E-8):0.011728175,(('Hop stunt viroid isolate 26x-c11':0.00656313,(('Hop stunt viroid isolate 26x-l28':0.01325732,'Hop stunt viroid isolate PM-26X clone 26x-p3':0.01317339):0.0,('Hop stunt viroid isolate PM-26x clone 26x-c18':0.02679277,('Citrus cachexia viroid isolate X-707-3':0.01295213,'Hop stunt viroid isolate PM-26x clone 26x-c26':0.04095234):1.0E-8):1.0E-8):1.0E-8):1.0E-8,(Hop_stunt_viroid_variant_FA:0.00660218,(Citrus_viroid_IIa_sequence:0.02582959,((('Citrus cachexia viroid isolate X-704-1':1.0E-8,'Citrus cachexia viroid isolate X-704-3':0.00635229):1.0E-8,('Hop stunt viroid clone A35-2-3':0.01328712,(('Citrus cachexia viroid isolate X-704-2':0.00630246,'Citrus cachexia viroid isolate X-704-M':1.0E-8):0.00638839,(Citrus_gummy_bark_viroid_strain_cachexia:1.0E-8,(Hop_stunt_viroid_isolate_CQ_clone_2:0.00620293,'Hop stunt viroid isolate CVd-IIb or Ca902':1.0E-8):1.0E-8):1.0E-8):0.00608168):0.00644475):1.0E-8,(('Hop stunt viroid - citrus strain CC-C isolate 1':1.0E-8,('Hop stunt viroid - citrus strain CC-H isolate 5':1.0E-8,('Hop stunt viroid - citrus strain CC-E isolate 5':1.0E-8,('Hop stunt viroid - citrus strain CC-D isolate 5':1.0E-8,(('Hop stunt viroid - citrus strain CC-C isolate 6':1.0E-8,('Hop stunt viroid isolate GZ-1':1.0E-8,('Hop stunt viroid - citrus strain CC-D isolate 6':1.0E-8,(Hop_stunt_viroid_isolate_IIbI2_:0.00637243,('Hop stunt viroid - citrus strain CC-E isolate 4':1.0E-8,('Hop stunt viroid - citrus strain CC-E isolate 1':1.0E-8,('Hop stunt viroid - citrus strain CC-G isolate 5':0.00632287,('Hop stunt viroid - citrus strain CC-E isolate 6':1.0E-8,('Hop stunt viroid - citrus strain CC-C isolate 3':1.0E-8,'Hop stunt viroid - citrus strain CC-C isolate 4':1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.6E-7):6.0E-8):0.0):0.0,('Hop stunt viroid - citrus strain CC-E isolate 2':1.0E-8,('Hop stunt viroid - citrus strain CC-A isolate 1':0.00632097,('Hop stunt viroid - citrus strain CC-B isolate 6':1.0E-8,('Hop stunt viroid - citrus strain CC-B isolate 1':1.0E-8,('Hop stunt viroid - citrus strain CC-H isolate 4':1.0E-8,('Hop stunt viroid - citrus strain CC-H isolate 2':1.0E-8,('Hop stunt viroid - citrus strain CC-G isolate 6':1.0E-8,('Hop stunt viroid - citrus strain CC-F isolate 6':1.0E-8,('Hop stunt viroid - citrus strain CC-F isolate 4':1.0E-8,(('Hop stunt viroid - citrus strain CC-F isolate 5':1.0E-8,'Hop stunt viroid - citrus strain CC-H isolate 3':1.0E-8):0.0063248,('Hop stunt viroid - citrus strain CC-F isolate 3':1.0E-8,('Hop stunt viroid - citrus strain CC-F isolate 1':1.0E-8,('Hop stunt viroid - citrus strain CC-E isolate 3':1.0E-8,'Hop stunt viroid - citrus strain CC-H isolate 1':0.00632591):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):3.2368E-4):0.00606217):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00632153,(Hop_stunt_viroid_clone_8153:0.0127432,(Citrus_viroid_IIb_Cachexia_sequence_302:0.01847926,((Hop_stunt_viroid_isolate_Mor4:0.00595367,('Hop stunt viroid clone A2-2-1':1.0E-8,('Hop stunt viroid clone A2-2-5':0.01195555,(Hop_stunt_viroid_isolate_Mor9:1.0E-8,(Hop_stunt_viroid_isolate_Mor17:1.0E-8,Hop_stunt_viroid_isolate_Mor61:1.0E-8):1.0E-8):0.00595172):1.0E-8):1.0E-8):1.0E-8,(Hop_stunt_viroid_isolate_Mor24:0.01207025,((('Hop stunt viroid isolate ISA 5-CT-I':0.01270495,('Hop stunt viroid isolate ISA 6-SR-I':1.0E-8,(Hop_stunt_viroid2:1.0E-8,'Hop stunt viroid citrus isolate HSV-cit variant 2 302':1.0E-8):0.00608328):1.0E-8):1.0E-8,(('Hop stunt viroid isolate cl-c19':0.01292116,('Hop stunt viroid isolate 26x-c33':0.00873773,((Citrus_cachexia_viroid:1.0E-8,Hop_stunt_viroid_isolate_Ca903:1.0E-8):0.00646277,((Hop_stunt_viroid_isolate_IIbS2:1.0E-8,(Hop_stunt_viroid_clone_HSVd1:1.0E-8,('Citrus cachexia viroid isolate ISA 4-CT-I':1.0E-8,Hop_stunt_viroid_variant_EX1:1.0E-8):1.0E-8):1.0E-8):1.0E-8,(('Citrus cachexia viroid isolate X-712-2':0.01229393,('Hop stunt viroid clone 3R-HSV':1.0E-8,('Hop stunt viroid clone 11R-HSVd':0.0063778,('Hop stunt viroid clone 4F-HSV':1.0E-8,Hop_stunt_viroid_clone_cl4:1.0E-8):1.0E-8):0.00636539):0.00666314):0.00609896,((('Citrus cachexia viroid isolate X-712-M':1.0E-8,Hop_stunt_viroid_isolate_IIbI13:0.03184123):0.0,('Hop stunt viroid isolate HSVd-IIb 814-1':1.0E-8,('Citrus cachexia viroid isolate X-712-3':1.0E-8,'Hop stunt viroid - citrus strain CC-A isolate 6':1.0E-8):1.0E-8):1.0E-8):1.0E-8,(('Citrus cachexia viroid isolate X-701-2':1.0E-8,'Citrus cachexia viroid isolate X-701-3':0.0064589):0.00644889,('Citrus cachexia viroid isolate X-715-1':1.0E-8,('Citrus cachexia viroid isolate X-701-1':1.0E-8,('Citrus cachexia viroid isolate X-701-M':0.01268047,('Citrus cachexia viroid isolate X-715-2':0.0062376,('Citrus cachexia viroid isolate X-712-1':1.0E-8,'Citrus cachexia viroid isolate X-715-M':1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00618631):0.00610693):0.0):0.0):0.01255807):0.00779726):0.00805918,((((Cucumber_pale_fruit_viroid_CPFV_301:1.0E-8,'Hop stunt viroid citrus isolate HSV-cit variant 1 302':1.0E-8):1.0E-8,(Cucumber_pale_fruit_viroid_CPFV_303:1.0E-8,'Genomic RNA of hop stunt viroid type HSV-c 303':1.0E-8):0.01197012):0.00596701,(('Hop stunt viroid isolate 26x-l22m':0.00317548,Hop_stunt_viroid_variant_BF:0.00316734):0.00563362,(('Hop stunt viroid isolate CVd-IIa 117':1.0E-8,(Hop_stunt_viroid_HSVd:1.0E-8,(Hop_stunt_viroid_isolate_Tahiti_lime_4:1.0E-8,'Hop stunt viroid variant 10SA1-IW1 302':1.0E-8):1.0E-8):1.0E-8):1.0E-8,('Hop stunt viroid isolate cl-c51':1.0E-8,(Hop_stunt_viroid_variant_FO:1.0E-8,(Hop_stunt_viroid_variant_E120P8:0.01215714,(Hop_stunt_viroid_variant_E180:1.0E-8,(('Hop stunt viroid isolate HSVd-IIa 815-11':0.00626368,'Hop stunt viroid isolate HSVd-IIa 815-3an':1.0E-8):0.00594515,((Hop_stunt_viroid_isolate_Tahiti_lime_1:1.0E-8,Hop_stunt_viroid_variant_E127:1.0E-8):1.0E-8,(('Hop stunt viroid - citrus strain CC-A isolate 4':1.0E-8,('Hop stunt viroid - citrus strain CC-B isolate 3':1.0E-8,Hop_stunt_viroid_isolate_Tahiti_lime_6:1.0E-8):1.0E-8):1.0E-8,('Hop stunt viroid isolate HSVd-IIa 817':0.03092212,(Hop_stunt_viroid_clone_8164:0.01241116,'Hop stunt viroid isolate HSVd-IIa 816-8':1.0E-8):1.0E-8):0.01215879):0.00602088):1.0E-8):0.00595549):0.0):0.00601773):1.0E-8):1.0E-8):1.0E-8):0.00595555):1.0E-8,(Hop_stunt_viroid_strain_yellow_corky_vein2:0.00608613,('Hop stunt viroid clone A35-2-4':0.00631791,(('Hop stunt viroid isolate 26X-l33':1.0E-8,(('Hop stunt viroid clone A35-2-5':1.0E-8,(Hop_stunt_viroid_isolate_IIaI3:1.0E-8,('Hop stunt viroid - citrus strain CC-D isolate 3':1.8314E-4,('Citrus viroid II isolate CVd II HN-01':1.0E-8,('Citrus viroid II isolate CVd II HN-02':0.0124134,'Citrus viroid II isolate CVd II HN-03':1.0E-8):0.006173):0.01242967):0.0059106):1.0E-8):1.0E-8,('Hop stunt viroid isolate cl-c3':1.0E-8,('Hop stunt viroid clone A35-2-1':1.0E-8,(Citrus_viroid_II:1.0E-8,(('Hop stunt viroid variant 10SA1-IW2 301':0.01239097,(Hop_stunt_viroid_isolate_UMCX1:1.0E-8,(Hop_stunt_viroid_isolate_IIaI14:1.0E-8,(Hop_stunt_viroid_isolate_IIaI4:1.0E-8,Hop_stunt_viroid_variant_AD1:1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00608466,('Hop stunt viroid isolate cl-c37':1.0E-8,(Hop_stunt_viroid_isolate_LMSX2:1.0E-8,('Hop stunt viroid isolate CVd-IIa or E819':1.0E-8,('Hop stunt viroid - citrus strain CC-G isolate 3':1.0E-8,(Hop_stunt_viroid_isolate_IIaS4:1.0E-8,('Hop stunt viroid - citrus strain CC-G isolate 4':1.0E-8,'Hop stunt viroid isolate HSVd-gb':0.0248375):1.0E-8):1.0E-8):0.0061106):1.0E-8):0.00311323):0.00305133):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8,(('Hop stunt viroid isolate cl-c25':0.00380022,Hop_stunt_viroid_isolate_SC_clone_1:0.00571543):0.00281827,('Hop stunt viroid - citrus complete sequence 303':1.0E-8,(Hop_stunt_viroid_isolate_CQ_clone_1:0.00609344,(Hop_stunt_viroid_isolate_CQ_clone_3:1.0E-8,(Hop_stunt_viroid_isolate_CVdIIA_10uy:1.0E-8,(Hop_stunt_viroid_isolate_soR2:1.0E-8,('Hop stunt viroid - citrus strain CC-B isolate 5':1.0E-8,('Hop stunt viroid - citrus strain CC-G isolate 2':1.0E-8,((Hop_stunt_viroid_isolate_IIaS1S3_HSVd:1.0E-8,('Hop stunt viroid - citrus strain CC-C isolate 5':1.0E-8,(Hop_stunt_viroid_isolate_Tahiti_lime_2:1.0E-8,('Hop stunt viroid isolate CVdIIa 205-2-1':1.0E-8,(Hop_stunt_viroid_isolate_Tahiti_lime_11:1.0E-8,('Hop stunt viroid - citrus strain CC-D isolate 2':0.0060895,('Hop stunt viroid - citrus strain CC-A isolate 2':0.00609085,(Hop_stunt_viroid_isolate_HSVdE117:0.0061423,('Hop stunt viroid isolate CVdIIa 54-2-2':0.01230596,(Hop_stunt_viroid_isolate_CVdIIa_17uy:0.01230551,Hop_stunt_viroid_isolate_soV1:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8,(Hop_stunt_viroid_isolate_Tahiti_lime_8:1.0E-8,(('Hop stunt viroid - citrus strain CC-D isolate 4':1.0E-8,('Hop stunt viroid - citrus strain CC-A isolate 5':1.0E-8,(Hop_stunt_viroid_isolate_IIaS1S3:1.0E-8,('Hop stunt viroid isolate CVdIIa 205-2-4':1.0E-8,Hop_stunt_viroid_variant_MK:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8,('Hop stunt viroid - citrus strain CC-B isolate 4':1.0E-8,('Hop stunt viroid - citrus strain CC-D isolate 1':1.0E-8,(Hop_stunt_viroid_isolate_Tahiti_lime_5:1.0E-8,('Hop stunt viroid isolate CVdIIa 54-2-1':1.0E-8,(Hop_stunt_viroid_isolate_Tahiti_lime_3:1.0E-8,('Hop stunt viroid - citrus strain CC-A isolate 3':1.0E-8,('Hop stunt viroid - citrus strain CC-C isolate 2':1.0E-8,(Hop_stunt_viroid_variant_WS1:1.0E-8,('Hop stunt viroid - citrus strain CC-B isolate 2':1.0E-8,(Hop_stunt_viroid_isolate_CVdIIA_11uy:0.00609001,(Hop_stunt_viroid_isolate_IIaI22:0.00609582,(Hop_stunt_viroid_isolate_SC_clone_2:0.00609503,(Hop_stunt_viroid_isolate_SC_clone_3:1.0E-8,Hop_stunt_viroid_isolate_soWn3:0.03048542):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):1.0E-8):0.01809424):1.0E-8,((('Hop stunt viroid clone 1R-HSVd':1.0E-8,Hop_stunt_viroid_clone_cl2:1.0E-8):0.03246311,((('Hop stunt viroid clone 15R-HSV':1.0E-8,Hop_stunt_viroid_isolate_CA909:1.0E-8):1.0E-8,('Hop stunt viroid clone 16F-HSV':1.0E-8,'Hop stunt viroid clone 17F-HSVd':1.0E-8):0.01852138):1.0E-8,(('Hop stunt viroid clone 5F-HSV':1.0E-8,Hop_stunt_viroid_clone_cl3:1.0E-8):0.02751551,(Hop_stunt_viroid_clone_HSVd12:1.0E-8,'Hop stunt viroid isolate ISA 7-RC-I':0.01632159):0.01685734):0.01220986):1.0E-8):1.0E-8,((Hop_stunt_viroid_strain_split_bark:0.04028431,(Hop_stunt_viroid_isolate_e:0.24148657,Hop_stunt_viroid_isolate_f:0.02046833):0.01793143):0.02488447,(((Hop_stunt_viroid_HSVd_isolate_genome_from_grapefruit_299:0.00620616,Hop_stunt_viroid_variant_MA:1.0E-8):0.00627353,(Hop_stunt_viroid_isolate_Rouge_de_Rousillon_D08:0.00651395,('Grapevine viroid grapevine isolate SHV-gGV complete genome 296':0.00613522,'Hop stunt viroid isolate Kernitsa-327':0.06138469):0.0065058):5.2E-7):1.0E-8,((Hop_stunt_viroid_isolate_HCSC08:0.01928174,((Hop_stunt_viroid_isolate_676:0.07623689,Hop_stunt_viroid_isolate_HNiagD08:0.18459304):0.0061207,(((('Hop stunt viroid clone 3HSVd2-3':0.01246956,Hop_stunt_viroid_isolate_hKIw:1.0E-8):4.71E-6,('Hop stunt viroid clone 3hsvdh3-5':0.01245625,Hop_stunt_viroid_isolate_hAIw5:1.0E-8):0.00627863):0.00645824,(('Hop stunt viroid RNA complete genome isolate hAIw36-5 296':0.00634357,(Hop_stunt_viroid_isolate_hAIw36:1.0E-8,Hop_stunt_viroid_isolate_hSIw:0.02344433):0.0):0.00739423,((Hop_stunt_viroid_isolate_HSVd2:0.00712882,(Hop_stunt_viroid_isolate_HSVd10:0.00617233,Hop_stunt_viroid_isolate_HSVd3:0.01310076):0.01430108):0.03100722,(('Hop stunt viroid clone 2hsvdh2-1':0.00623588,('Hop stunt viroid clone 5hsvdh5-3':0.01235383,('Hop stunt viroid clone 2hsvdh2-4':1.0E-8,('Hop stunt viroid clone 5hsvdh5-2':0.00614579,('Hop stunt viroid clone 5hsvdh5-1':0.00659798,('Hop stunt viroid clone 2hsvdh2-2':0.00615117,'Hop stunt viroid clone 2hsvdh2-6':1.0E-8):1.0E-8):0.0):0.0):0.0):1.0E-8):0.0,('Hop stunt viroid clone 3hsvdh3-4':1.0E-8,((Hop_stunt_viroid_isolate_hKFKi:1.0E-8,('Hop stunt viroid clone 2hsvdh2-3':1.0E-8,'Hop stunt viroid clone 2hsvdh2-7':0.00614864):0.00616242):1.0E-8,(Hop_stunt_viroid_isolate_hFK82:1.0E-8,(Hop_stunt_viroid_HSV_Korean_strain_mRNA_for_viroid_297:1.0E-8,Hop_stunt_viroid_variant_WP:0.00619656):1.0E-8):0.00616389):0.01256125):0.00619384):1.79E-6):0.01286522):0.00908382):0.00661956,((Hop_stunt_viroid_isolate_HCSC01:0.01258094,Hop_stunt_viroid_isolate_HCSC10:0.01246182):0.00622708,('Hop stunt viroid isolate 09-2009-2140hs':0.00619797,((('Hop stunt viroid clone 31HSVd2-2':1.0E-8,'Hop stunt viroid clone 3HSVd2-14':1.0E-8):0.00620364,((Hop_stunt_viroid_isolate_HSVd16:1.0E-8,('Hop stunt viroid clone lz21 hsvdp11-14':1.0E-8,'Hop stunt viroid clone t19HSVd11-6':1.0E-8):0.0):0.00561816,('Hop stunt viroid isolate Aridaia-570':0.01241659,(Hop_stunt_viroid_isolate_391a:1.0E-8,Hop_stunt_viroid_isolate_HSVd7:1.0E-8):1.0E-8):0.00618466):5.6118E-4):1.0E-8,(('Hop stunt viroid clone 3HSVd2-11':1.0E-8,(Hop_stunt_viroid_isolate_HSVd4:0.02623284,((('Hop stunt viroid clone 62HSVd2-4':1.0E-8,Hop_stunt_viroid_clone_HSVd:0.0195427):0.03011924,(Hop_Stunt_Viroid_HSVd_298:0.01259083,(Hop_stunt_viroid_clone_HSVd3:0.00616839,(Hop_stunt_viroid_clone_HSVd2:0.00616559,('Hop stunt viroid isolate 09-2009-854':1.0E-8,(Hop_stunt_viroid_German_grapevine_cultivar_Riesling_genome_298:1.0E-8,Hop_stunt_viroid_grapevine_variant_IIa_sequence:0.00615376):1.0E-8):1.0E-8):1.0E-8):0.0):0.00631585):0.0,(Hop_stunt_viroid_isolate_apricot_Ring_Pox:0.01288444,((Hop_stunt_viroid_isolate_HSVd11:1.0E-8,Hop_stunt_viroid_isolate_HSVd5:1.0E-8):0.00602418,(Hop_stunt_viroid_isolate_HSVd6:0.01278101,(Hop_stunt_viroid_isolate_HSVd12:0.0062873,(Hop_stunt_viroid_isolate_HSVd15:1.0E-8,(Hop_stunt_viroid_isolate_HSVd13:0.00628732,Hop_stunt_viroid_isolate_HSVd14:0.00629265):1.0E-8):1.0E-8):0.0):0.00659715):1.0E-8):0.0197563):0.00717477):0.0144775):0.01405353,((Dapple_peach_fruit_disease_viroid_from_peach_dapple_fruit:0.01245356,(Hop_Stunt_Viroid_HSV_297:1.0E-8,(Genomic_of_hop_stunt_viroid:1.0E-8,Hop_stunt_viroidHSV_sequence_297:1.0E-8):1.0E-8):1.0E-8):0.00618044,('Hop stunt viroid clone 67HSVd2-6':0.00618544,('Hop stunt viroid clone He HSVd2-6':0.00620336,((Hop_stunt_viroid_grapevine_variant_Ia_sequence:1.0E-8,Hop_stunt_viroid_grapevine_variant_Ic_sequence:0.00618268):0.00618657,('Hop stunt viroid clone 67HSVd 2-8':0.00618657,('Hop stunt viroid isolate sh-ay-01':1.0E-8,('Hop stunt viroid clone 67HSVd2-3':0.0061864,(Hop_stunt_viroid_grapevine_variant_Ie_sequence:0.00618636,((Hop_stunt_viroid_isolate_Thailand:1.0E-8,'Hop stunt viroid RNA complete genome isolate hKF82-4 297':0.01246895):1.0E-8,('Hop stunt viroid clone Tu HSVd 2-7':1.0E-8,('Hop stunt viroid clone He HSVd2-2':1.0E-8,('Hop stunt viroid clonechi100Y-02-4-5 297':1.0E-8,('Hop stunt viroid clone 67HSVd2-1':1.0E-8,('Hop stunt viroid clone 5HSVd2-9':1.0E-8,('Hop stunt viroid clone 4HSVd2-2':1.0E-8,('Hop stunt viroid clone 11HSVd2-7':1.0E-8,('Hop stunt viroid clone 10HSVd2-6':1.0E-8,(Hop_stunt_viroid_isolate_H1:1.0E-8,(Hop_stunt_viroid_clone_HSVd_2:1.0E-8,('Hop stunt viroid clone He HSVd2-1':1.0E-8,('Hop stunt viroid clone 7HSVd2-2':1.0E-8,('Hop stunt viroid clone 48HSVd2-12':1.0E-8,('Hop stunt viroid clone 31HSVd2-1':1.0E-8,('Genomic RNA of hop stunt viroid type HSV-g 297':1.0E-8,(Grapevine_viroid_Hop_stunt_viroid_297:0.00619201,('Hop stunt viroid clone Tu HSVd 1-16':0.00618951,('Hop stunt viroid clone 7HSVd2-4':0.00619123,(Hop_stunt_viroid_grapevine_variant_Id_sequence:1.0E-8,('Hop stunt viroid clone 11HSVd2-5':0.00619112,Hop_stunt_viroid_grapevine_variant_Ib_sequence:0.00627356):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.0):0.0):0.0):0.0):0.0):0.0):0.0,(('Hop stunt viroid clonechi100Y-03-2-6 296':0.00641218,('Hop stunt viroid clonechi100Y-02-4-2 296':1.0E-8,'Hop stunt viroid clonechi100Y-03-2-8 296':1.0E-8):1.0E-8):0.0255036,('Hop stunt viroid clonechi100Y-03-2-7 300':0.012776,('Hop stunt viroid clonechi100Y-02-4-4 296':1.0E-8,(Hop_stunt_viroid_isolate_HSVd:0.0624485,((Hop_stunt_viroid_isolate_dapple_plum_fruit:1.0E-8,(Hop_stunt_viroid_clone_BA1B:0.00624395,(Hop_stunt_viroid_isolate_Roma1:0.03182543,(Hop_stunt_viroid_clone_BA4A_and_BA7B:1.0E-8,(Hop_stunt_viroid_isolate_HSVd52:1.0E-8,(Hop_stunt_viroid_isolate_HSVd32:0.00625174,(Hop_stunt_viroid_isolate_HSVd42:0.00623036,(Hop_stunt_viroid_isolate_HSVd17:0.01257692,Hop_stunt_viroid_isolate_HSVd22:0.0062338):1.0E-8):1.0E-8):1.0E-8):0.0):0.0):0.0):0.00706711):0.02228566,((Hop_stunt_viroid_isolate_HSVd8:0.00645063,((Hop_stunt_viroid_clone_B6B:0.00643509,(Hop_stunt_viroid_clone_Voras:0.01241615,(Hop_stunt_viroid_isolate_HSVd62:0.00643642,Hop_stunt_viroid_isolate_HSVd72:1.0E-8):0.0063831):0.0):0.0,(Hop_stunt_viroid_clone_Jena:0.01860275,(Hop_stunt_viroid_clone_Konstantinos:0.00612283,(Hop_stunt_viroid_clone_Pinovo:1.0E-8,(Hop_stunt_viroid_clone_Demetra:1.0E-8,(Hop_stunt_viroid_isolate_570:1.0E-8,(Hop_stunt_viroid_clone_Paiko:0.01238573,(Hop_stunt_viroid_isolate_580:0.02222936,Hop_stunt_viroid_isolate_HSVd9:1.0E-8):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.01505754,('Hop 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X5HSVd11-1':0.00624318,('Hop stunt viroid clone tz6HSVd11-5':0.00623817,(Hop_stunt_viroid_clone_PR1A:0.00623063,(Hop_stunt_viroid_clone_PR2A:0.01259092,('Hop stunt viroid clone lz21 hsvdp11-6':1.0E-8,(Hop_stunt_viroid_clone_B1B:1.0E-8,(Hop_stunt_viroid_clone_alm1261:1.0E-8,(Hop_stunt_viroid_clone_hsvd_J2:1.0E-8,(Dapple_plum_and_peach_fruit_disease_viroid_isolate_FP3:1.0E-8,('Hop stunt viroid clone X5HSVd11-2':1.0E-8,('Hop stunt viroid clone tz6HSVd11-4':1.0E-8,(Hop_stunt_viroid_clone_PR1B:0.00623407,'Hop stunt viroid clone xz17 hsvdp11-2':0.00623583):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8,('Hop stunt viroid clone t48HSVd11-1':0.00622146,(('Hop stunt viroid clone 6aHSVd11-2':0.00620538,(((Hop_stunt_viroid_clone_hsvd_J10:0.00620478,'Hop stunt viroid clone t48HSVd11-4':1.0E-8):0.00619093,('Hop stunt viroid clone tz18HSVd11-1':1.0E-8,('Hop stunt viroid clone lz16 hsvdp11-1':1.0E-8,'Hop stunt viroid clone tz18HSVd11-3':1.0E-8):0.00620706):0.00619247):1.0E-8,('Hop stunt viroid clone lz16 hsvdp11-7':1.0E-8,('Hop stunt viroid clone L5HSVdP11-10':1.0E-8,(Hop_stunt_viroid_clone_hsvd_J13:1.0E-8,('Hop stunt viroid clone 1aHSVd11-3':1.0E-8,('Hop stunt viroid clone xz17 hsvdp11-3':1.0E-8,('Hop stunt viroid clone t19HSVd11-5':0.01245864,(Hop_stunt_viroid_clone_hsvd_J11:0.0061929,('Hop stunt viroid clone lz6 hsvdp11-6':0.00618774,'Hop stunt viroid clone lz6 hsvdp11-9':0.01244277):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00620209,(('Hop stunt viroid clone 5 hsvdp11-1':1.0E-8,'Hop stunt viroid clone lz16 hsvdp11-6':0.00623449):0.00621533,('Hop stunt viroid clone t48HSVd11-2':0.01247472,(Hop_stunt_viroid_clone_hsvd_J4:0.00622433,((Hop_stunt_viroid_clone_hsvd_J3:9.987E-5,('Hop stunt viroid clone 4aHSVd11-6':1.0E-8,'Hop stunt viroid clone 6aHSVd11-5':0.00633693):0.00633805):0.00611195,(Hop_stunt_viroid_clone_hsvd_J8:0.00621258,('Hop stunt viroid clone lz21 hsvdp11-7':0.01253234,(Hop_stunt_viroid_clone_hsvd_J9:0.00620746,('Hop stunt viroid clone 6aHSVd11-4':0.00620745,(Hop_stunt_viroid_clone_hsvd_J12:0.00621145,('Hop stunt viroid clone lz6 hsvdp11-8':1.0E-8,(Hop_stunt_viroid_clone_hsvd_J1:1.0E-8,('Hop stunt viroid clone 5aHSVd11-2':1.0E-8,('Hop stunt viroid clone L5HSVdP11-1':1.0E-8,('Hop stunt viroid clone 5aHSVd11-1':1.0E-8,('Hop stunt viroid clone 5 hsvdp11-2':1.0E-8,('Hop stunt viroid clone X5HSVd11-4':1.0E-8,('Hop stunt viroid clone 4aHSVd11-2':0.01248273,(Hop_stunt_viroid_clone_hsvd_J6:0.00621014,(Hop_stunt_viroid_clone_hsvd_J5:0.00621014,(Hop_stunt_viroid_clone_hsvd_J7:0.00621277,('Hop stunt viroid clone lz21 hsvdp11-24':0.0062109,('Hop stunt viroid clone lz21 hsvdp11-9':0.00621086,('Hop stunt viroid clone lz16 hsvdp11-9':0.01249143,('Hop stunt viroid clone 4aHSVd11-5':0.00575664,'Hop stunt viroid clone lz16 hsvdp11-8':0.00374901):0.00376611):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.00703081):0.0):0.0):0.0):1.43E-6):0.00749401):0.03493096):0.03388399):0.01868616):0.02559575):0.0):0.01373981):0.0):0.02498684):0.0143275):0.0059261):1.0E-8):0.0):0.01529716):0.01598218):1.0E-8):0.01223869):1.0E-8):0.01549389):0.011728175); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr60050] END;