#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 17, 2024; 10:37 GMT

TreeBASE (cc) 1994-2008

Study reference:
Ohtani M., Kondo T., Tani N., Ueno S., Lee L.S., Ng K.K., Muhammad N., Finkeldey
R., Na'iem M., Indrioko S., Kamiya K., Harada K., Diway B., Khoo E., Kawamura K.,
& Tsumura Y. 2013. Nuclear and chloroplast DNA phylogeography reveals Pleistocene
divergence and subsequent secondary contact of two genetic lineages of the tropical
rainforest tree species Shorea leprosula (Dipterocarpaceae) in Southeast
Asia. Molecular Ecology, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S13763]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=23;
        TAXLABELS
            Shorea_leprosula_Haplotype_1a
            Shorea_leprosula_Haplotype_1c
            Shorea_leprosula_Haplotype_1d
            Shorea_leprosula_Haplotype_1e
            Shorea_leprosula_Haplotype_2
            Shorea_leprosula_Haplotype_3a
            Shorea_leprosula_Haplotype_3b
            Shorea_leprosula_Haplotype_3d
            Shorea_leprosula_Haplotype_4
            Shorea_leprosula_Haplotype_5a
            Shorea_leprosula_Haplotype_5b
            Shorea_leprosula_Haplotype_5c
            Shorea_leprosula_Haplotype_5d
            Shorea_leprosula_Haplotype_5f
            Shorea_leprosula_Haplotype_5g
            Shorea_leprosula_Haplotype_5j
            Shorea_leprosula_Haplotype_5k
            Shorea_leprosula_Haplotype_5l
            Shorea_leprosula_Haplotype_5m
            Shorea_leprosula_Haplotype_5n
            Shorea_leprosula_Haplotype_6a
            Shorea_leprosula_Haplotype_6b
            Shorea_parvifolia
            ;
END;

BEGIN TREES;
      TITLE Bayesian_Result;
      LINK TAXA = Taxa;
      TREE 50%_maj_rule = [&R] (Shorea_parvifolia:0.001048,(Shorea_leprosula_Haplotype_4:6.99E-4,(((Shorea_leprosula_Haplotype_1a:3.46E-4,Shorea_leprosula_Haplotype_1c:6.99E-4,Shorea_leprosula_Haplotype_1d:6.93E-4,Shorea_leprosula_Haplotype_1e:6.91E-4):6.94E-4,Shorea_leprosula_Haplotype_2:3.47E-4,(Shorea_leprosula_Haplotype_3a:3.49E-4,Shorea_leprosula_Haplotype_3b:6.91E-4,Shorea_leprosula_Haplotype_3d:6.9E-4)99.8320:6.96E-4)99.8555:6.99E-4,(Shorea_leprosula_Haplotype_5a:3.47E-4,Shorea_leprosula_Haplotype_5b:0.001038,Shorea_leprosula_Haplotype_5c:0.001037,Shorea_leprosula_Haplotype_5d:6.99E-4,Shorea_leprosula_Haplotype_5f:6.97E-4,Shorea_leprosula_Haplotype_5g:6.95E-4,Shorea_leprosula_Haplotype_5j:6.98E-4,Shorea_leprosula_Haplotype_5k:6.93E-4,Shorea_leprosula_Haplotype_5l:6.93E-4,Shorea_leprosula_Haplotype_5m:6.93E-4,Shorea_leprosula_Haplotype_5n:6.96E-4,(Shorea_leprosula_Haplotype_6a:3.48E-4,Shorea_leprosula_Haplotype_6b:6.92E-4)99.9995:0.001042)99.0240:6.94E-4)99.8295:6.99E-4)99.4065:0.001048);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr60083]


END;