#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 17, 2024; 6:06 GMT

TreeBASE (cc) 1994-2008

Study reference:
Zhu M., Ren A., Wen W., & Gao Y. 2013. Diversity and taxonomy of endophytes from
Leymus chinensis in the Inner Mongolia steppe of China. FEMS Microbiology Letters,
.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S12959]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=60;
        TAXLABELS
            Dussiella_tuberiformis_201937
            Epichloe_amarillans_200743
            Epichloe_amarillans_200744
            Epichloe_baconii_200745
            Epichloe_baconii_76552
            Epichloe_baconii_90167
            Epichloe_brachyelytri_201561
            Epichloe_bromicola_200749
            Epichloe_bromicola_201558
            Epichloe_clarkii_200742
            Epichloe_elymi_200850
            Epichloe_elymi_201551
            Epichloe_elymi_201554
            Epichloe_elymi_201556
            Epichloe_festucae_201550
            Epichloe_festucae_28
            Epichloe_festucae_90661
            Epichloe_glyceriae_200755
            Epichloe_sp._204
            Epichloe_sp._207
            Epichloe_sp._224
            Epichloe_sp._229
            Epichloe_sp._303
            Epichloe_sp._312
            Epichloe_sp._330
            Epichloe_sp._336
            Epichloe_sp._410
            Epichloe_sp._414
            Epichloe_sp._429
            Epichloe_sylvatica_200751
            Epichloe_typhina_200736
            Epichloe_typhina_200738
            Epichloe_typhina_200739
            Epichloe_typhina_200740
            Epichloe_typhina_200851
            Epichloe_typhina_201666
            Epichloe_typhina_201667
            Neotyphodium_aotearoae_829
            Neotyphodium_australiense_937
            Neotyphodium_chisosum_64037
            Neotyphodium_funkii_MYA_2583_a
            Neotyphodium_funkii_MYA_2583_b
            Neotyphodium_gansuense_E7083
            Neotyphodium_gansuense_MTII_H05
            Neotyphodium_gansuense_MTIII_X01
            Neotyphodium_gansuense_var._inebrians_817
            Neotyphodium_guerinii_MYA_1235_a
            Neotyphodium_guerinii_MYA_1235_b
            Neotyphodium_melicicola_822
            Neotyphodium_melicicola_823
            Neotyphodium_melicicola_827_a
            Neotyphodium_melicicola_827_b
            Neotyphodium_sibiricum_MTI_I02
            Neotyphodium_sibiricum_MTI_I03
            Neotyphodium_siegelii_e915_a
            Neotyphodium_siegelii_e915_b
            Neotyphodium_tembladerae_1169_a
            Neotyphodium_tembladerae_1169_b
            Neotyphodium_uncinatum_e167_a
            Neotyphodium_uncinatum_e167_b
            ;
END;

BEGIN TREES;
      TITLE 'actG of Epichloe from Leymus chinensis-mp';
      LINK TAXA = Taxa;
      TREE PAUP_1 = [&R] (Dussiella_tuberiformis_201937:0.28764656,((Neotyphodium_gansuense_var._inebrians_817:0.01043569,((Neotyphodium_guerinii_MYA_1235_b:1.0E-8,Neotyphodium_sibiricum_MTI_I02:1.0E-8,Neotyphodium_sibiricum_MTI_I03:1.0E-8)93:0.00621481,(Neotyphodium_gansuense_E7083:1.0E-8,Neotyphodium_gansuense_MTII_H05:0.0020523,Neotyphodium_gansuense_MTIII_X01:1.0E-8)100:0.01257241)79:0.00207581)94:0.02886607,(Epichloe_baconii_200745:0.00196816,Epichloe_brachyelytri_201561:0.01192288,Epichloe_glyceriae_200755:0.00801816,(Epichloe_amarillans_200743:0.00193418,Epichloe_amarillans_200744:0.00397246)98:0.01205065,(Epichloe_baconii_76552:1.0E-8,Epichloe_baconii_90167:1.0E-8)100:0.01593122,(Epichloe_festucae_90661:1.0E-8,Epichloe_festucae_28:0.00393746,Epichloe_festucae_201550:1.0E-8,Neotyphodium_siegelii_e915_b:0.00392728,Neotyphodium_funkii_MYA_2583_a:0.00247342,Neotyphodium_melicicola_822:1.0E-8,Neotyphodium_melicicola_823:1.0E-8,Neotyphodium_melicicola_827_b:1.0E-8,Neotyphodium_tembladerae_1169_b:0.00393599)100:0.01595264,((Neotyphodium_aotearoae_829:0.00388592,Neotyphodium_melicicola_827_a:0.00386678)99:0.00787365,((Epichloe_sylvatica_200751:1.0E-8,Epichloe_typhina_200739:0.00582754)82:0.00382027,(Epichloe_typhina_201667:0.00192245,Neotyphodium_uncinatum_e167_b:1.0E-8,Neotyphodium_australiense_937:0.00578649,Neotyphodium_tembladerae_1169_a:0.0057777,((Epichloe_typhina_200738:0.00364713,Epichloe_typhina_200740:0.00216265)74:0.00439724,((Epichloe_clarkii_200742:1.0E-8,Epichloe_typhina_200736:0.00387136)92:0.00557899,(Neotyphodium_guerinii_MYA_1235_a:0.01273794,(Epichloe_typhina_200851:0.00191132,Epichloe_typhina_201666:1.0E-8)99:0.01054098)51:0.0037387)55:0.00294007)86:0.0168892)60:0.00390052)84:0.01196634)82:0.00990958,((Neotyphodium_funkii_MYA_2583_b:1.0E-8,(Epichloe_elymi_200850:1.0E-8,Epichloe_elymi_201551:1.0E-8,Epichloe_elymi_201554:1.0E-8,Epichloe_elymi_201556:1.0E-8)63:0.00201619)98:0.01034306,((Epichloe_bromicola_200749:0.0020359,Epichloe_bromicola_201558:1.0E-8,Neotyphodium_uncinatum_e167_a:1.0E-8,Neotyphodium_siegelii_e915_a:0.00407976)99:0.01252684,(Neotyphodium_chisosum_64037:0.00401905,Epichloe_sp._303:1.0E-8,Epichloe_sp._312:1.0E-8,Epichloe_sp._330:1.0E-8,Epichloe_sp._336:1.0E-8,Epichloe_sp._410:1.0E-8,Epichloe_sp._414:1.0E-8,Epichloe_sp._429:1.0E-8,(Epichloe_sp._204:1.0E-8,Epichloe_sp._207:1.0E-8,Epichloe_sp._224:1.0E-8,Epichloe_sp._229:1.0E-8)62:0.00200736)95:0.00602329)98:0.0145572)71:0.01010937)52:0.00792406):0.28764656);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr60767]


END;