#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 18, 2024; 19:44 GMT

TreeBASE (cc) 1994-2008

Study reference:
Willyard A., Cronn R., & Liston A. 2009. Reticulate evolution and incomplete lineage
sorting among the ponderosa pines. Molecular Phylogenetics and Evolution, 52(2):
498-511.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S9961]

BEGIN TAXA;
        TITLE  M4362;
        DIMENSIONS NTAX=46;
        TAXLABELS
            Pinus_arizonica_AZ_ARIZ02
            Pinus_arizonica_NM_ARIZ01
            Pinus_arizonica_var_stormiae_Coahuila_ARIZ03
            Pinus_contorta_outgroup_CONT06
            Pinus_cooperi_Durango2_COOP01S2
            Pinus_cooperi_Durango3_COOP01S3
            Pinus_coulteri_Anza_Borrego_CA_COUL03
            Pinus_coulteri_San_Gabriels_CA_COUL02
            Pinus_coulteri_Santa_Barbara_CA_COUL01
            Pinus_devoniana_Guerrero_DEVO03
            Pinus_devoniana_Hidalgo_DEVO01
            Pinus_devoniana_Michoacan_DEVO02
            Pinus_douglasiana_Jalisco_DOUG01
            Pinus_durangensis_Chihuahua_DURA01
            Pinus_engelmannii_Cave_Creek_AZ_ENGE01
            Pinus_engelmannii_Florida_Canyon_AZ_ENGE02
            Pinus_hartwegii_Guatemala1_HART04
            Pinus_hartwegii_Guatemala2_DONN02
            Pinus_hartwegii_Guerrero_HART07
            Pinus_hartwegii_Mexico_HART01
            Pinus_jeffreyi_Bishop_CA_JEFF04
            Pinus_jeffreyi_Mt_Rose_NV_JEFF13
            Pinus_jeffreyi_Reno_NV_JEFF14
            Pinus_jeffreyi_San_Gabriels_CA_JEFF01
            Pinus_jeffreyi_Susanville_CA_JEFF06
            Pinus_maximinoi_Honduras_MAXI03
            Pinus_maximinoi_Oaxaca_MAXI01
            Pinus_montezumae_Guatemala_MONZ02
            Pinus_montezumae_Hidalgo_MONZ01
            Pinus_ponderosa_Abert_Rim_OR_WASH12
            Pinus_ponderosa_Big_Bear_Lake_CA_POND04
            Pinus_ponderosa_Blue_Mts_OR_WASH15
            Pinus_ponderosa_WA_POND02
            Pinus_ponderosa_var_scopulorum_UT_POND10
            Pinus_pseudostrobus_Guatemala_PSEU03
            Pinus_sabiniana_Clearlake_CA_SABI02
            Pinus_sabiniana_Redding_CA_SABI04
            Pinus_sabiniana_Weaverville_CA_SABI01
            Pinus_torreyana_TORR01
            Pinus_washoensis_Babbitt_Peak_CA_WASH02
            Pinus_washoensis_Mt_Rose_NV_WASH03
            Pinus_washoensis_Warners1_CA_WASH01
            Pinus_washoensis_Warners2_CA_WASH04
            Pinus_washoensis_Warners3_CA_WASH13
            Pinus_washoensis_Warners4_CA_WASH14
            Pinus_yecorensis_YECO02
            ;
END;

BEGIN TREES;
      TITLE Tb10339;
      LINK TAXA = M4362;
      TREE Fig._1 = [&R] ((Pinus_maximinoi_Oaxaca_MAXI01,((((Pinus_durangensis_Chihuahua_DURA01,Pinus_montezumae_Hidalgo_MONZ01),Pinus_maximinoi_Honduras_MAXI03),Pinus_arizonica_var_stormiae_Coahuila_ARIZ03,(Pinus_arizonica_NM_ARIZ01,Pinus_engelmannii_Florida_Canyon_AZ_ENGE02),(Pinus_ponderosa_WA_POND02,Pinus_washoensis_Babbitt_Peak_CA_WASH02),(Pinus_ponderosa_Big_Bear_Lake_CA_POND04,Pinus_ponderosa_var_scopulorum_UT_POND10),Pinus_ponderosa_Abert_Rim_OR_WASH12,Pinus_washoensis_Warners4_CA_WASH14,(Pinus_ponderosa_Blue_Mts_OR_WASH15,Pinus_washoensis_Warners1_CA_WASH01,Pinus_washoensis_Warners3_CA_WASH13),Pinus_washoensis_Mt_Rose_NV_WASH03,Pinus_washoensis_Warners2_CA_WASH04,(Pinus_arizonica_AZ_ARIZ02,Pinus_cooperi_Durango3_COOP01S3,Pinus_cooperi_Durango2_COOP01S2,Pinus_engelmannii_Cave_Creek_AZ_ENGE01,(Pinus_devoniana_Michoacan_DEVO02,Pinus_devoniana_Guerrero_DEVO03),Pinus_devoniana_Hidalgo_DEVO01,Pinus_hartwegii_Guatemala2_DONN02,Pinus_hartwegii_Mexico_HART01,Pinus_hartwegii_Guatemala1_HART04,Pinus_hartwegii_Guerrero_HART07,Pinus_montezumae_Guatemala_MONZ02,Pinus_douglasiana_Jalisco_DOUG01,Pinus_pseudostrobus_Guatemala_PSEU03),Pinus_yecorensis_YECO02),((Pinus_coulteri_Santa_Barbara_CA_COUL01,Pinus_coulteri_Anza_Borrego_CA_COUL03,Pinus_coulteri_San_Gabriels_CA_COUL02,Pinus_jeffreyi_Reno_NV_JEFF14,(Pinus_jeffreyi_San_Gabriels_CA_JEFF01,(Pinus_jeffreyi_Susanville_CA_JEFF06,Pinus_jeffreyi_Mt_Rose_NV_JEFF13)),Pinus_jeffreyi_Bishop_CA_JEFF04),(Pinus_sabiniana_Weaverville_CA_SABI01,(Pinus_sabiniana_Clearlake_CA_SABI02,Pinus_sabiniana_Redding_CA_SABI04),Pinus_torreyana_TORR01)))),Pinus_contorta_outgroup_CONT06);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr6196]


END;