#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 19, 2024; 7:05 GMT

TreeBASE (cc) 1994-2008

Study reference:
Scully E.D., Hoover K., Carlson J.E., Tien M., & Geib S.M. 2013. Midgut Transcriptome
Profiling of Anoplophora glabripennis, a Lignocellulose Degrading Cerambycid
Beetle. BMC Genomics, 14(850).

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S14849]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=23;
        TAXLABELS
            Anoplophora_glabripennis_m7828
            Chrysomela_tremulae_GH48_1
            Chrysomela_tremuleae_GH48_2
            Dendroctonous_ponderosae
            Gastrophysa_viridula_GH48_1
            Gastrophysa_viridula_GH48_2
            Leptinotarsa_decemlineata_GH48_1
            Leptinotarsa_decemlineata_GH48_2
            Otiorhynchus_sulcatus
            Sitophilus_oryzae
            Streptomyces_avermitilis_MA_4680
            Streptomyces_davawensis_JCM_4913
            Streptomyces_sp_5009
            Streptomyces_sp_84
            Streptomyces_sp_A32
            Streptomyces_sp_BCW1
            Streptomyces_sp_M045
            Streptomyces_sp_TK24
            Streptomyces_sp_Tue57
            Streptomyces_sp_ZG0656
            Streptomyces_sviceus_GH48_1
            Streptomyces_sviceus_GH48_2
            Streptomyces_turgidiscabies_Car8
            ;
END;

BEGIN TREES;
      TITLE GH48.LGIGF.consensus;
      LINK TAXA = Taxa;
      TREE Fig._10 = [&R] ((Anoplophora_glabripennis_m7828:0.16081535542,((Otiorhynchus_sulcatus:0.31221365356,(Sitophilus_oryzae:0.14482076248,Dendroctonous_ponderosae:0.2200385934)99.80:0.139105552425)50.60:0.109757603162,((Leptinotarsa_decemlineata_GH48_1:0.23290925828,(Gastrophysa_viridula_GH48_1:0.09329533716,Chrysomela_tremulae_GH48_1:0.08124732924)100.00:0.1044813463)75.00:0.05415086096,(Leptinotarsa_decemlineata_GH48_2:0.3519220204,(Chrysomela_tremuleae_GH48_2:0.0876841601,Gastrophysa_viridula_GH48_2:0.09669454776)99.80:0.117340903106)92.80:0.0936656730603)44.00:0.0512521768182)95.80:0.0747805258873)100.00:0.19535823458,(Streptomyces_sp_BCW1:0.09560718304,((Streptomyces_sviceus_GH48_1:0.01783616872,Streptomyces_sviceus_GH48_2:0.0143514428)99.80:0.0312746952305,(Streptomyces_sp_84:0.10028512508,((Streptomyces_sp_M045:0.0818645245,(Streptomyces_avermitilis_MA_4680:0.04078020132,Streptomyces_sp_5009:0.0572819758)35.20:0.0194800260795)17.00:0.0184159038824,(Streptomyces_turgidiscabies_Car8:0.05271737688,((Streptomyces_davawensis_JCM_4913:0.0374608504,Streptomyces_sp_Tue57:0.0399036566)85.40:0.0254679895316,(Streptomyces_sp_ZG0656:0.01883692666,(Streptomyces_sp_TK24:1.0E-8,Streptomyces_sp_A32:1.0E-8):0.00385668016317)85.80:0.0793056723)100.00:0.0263473852068)82.20:0.0160999090654)42.80:0.0164410546)10.00:0.0132034462931)23.20:0.0376325215864)70.60:0.19535823458);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr67563]


END;