#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 24, 2024; 9:54 GMT

TreeBASE (cc) 1994-2008

Study reference:
Dadheech P., Ballot A., Casper P., Kotut K., Novelo E., Lemma B., Pröschold T., &
Krienitz L. 2010. Phylogenetic relationship and divergence among planktonic strains
of Arthrospira (Oscillatoriales, Cyanobacteria) of African, Asian and American
origin deduced by 16S–23S ITS and phycocyanin operon sequences. Phycologia,
49(4): 361-372.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S10238]

BEGIN TAXA;
        TITLE  M4952;
        DIMENSIONS NTAX=75;
        TAXLABELS
            Arthrospira_fusiformis_AB2002_01_AY575923
            Arthrospira_fusiformis_AB2002_02_AY575924
            Arthrospira_fusiformis_AB2002_03_AY575925
            Arthrospira_fusiformis_AB2002_04_AY575926
            Arthrospira_fusiformis_AB2002_05_AY575927
            Arthrospira_fusiformis_AB2002_10_AY575928
            Arthrospira_fusiformis_AB2002_11_AY575929
            Arthrospira_fusiformis_AJ292321
            Arthrospira_fusiformis_AJ292328
            Arthrospira_indica_AJ292334
            Arthrospira_indica_AJ292336
            Arthrospira_indica_PD1997_ram_AY575931
            Arthrospira_indica_PD1998_pus_AY575930
            Arthrospira_indica_PD2002_ana_AY575932
            Arthrospira_maxima_AJ292323
            Arthrospira_platensis_AJ292322
            Arthrospira_platensis_AJ292337
            'Arthrospira platensis Sp-1 AJ292324'
            'Arthrospira platensis Sp-17 EF432319'
            'Arthrospira platensis Sp-2 DQ279768'
            'Arthrospira platensis Sp-7 EF432313'
            'Arthrospira platensis str. Lefevre 1963 M-132-1 FJ798612'
            Arthrospira_sp._3832_AJ292339
            Arthrospira_sp._AB2002_38
            Arthrospira_sp._AB2006_01
            Arthrospira_sp._AB2006_02
            Arthrospira_sp._AB2006_03
            Arthrospira_sp._AB2006_04
            Arthrospira_sp._AB2006_05
            Arthrospira_sp._AB2006_06
            Arthrospira_sp._AB2006_08
            Arthrospira_sp._AB2006_09
            Arthrospira_sp._AB2006_10
            Arthrospira_sp._AB2006_11
            Arthrospira_sp._AB2006_12
            Arthrospira_sp._AB2006_13
            Arthrospira_sp._AB2006_14
            Arthrospira_sp._AB2006_15
            Arthrospira_sp._AB2006_16
            Arthrospira_sp._C1_AJ292330
            Arthrospira_sp._COMPERE_86.79_AJ292327
            Arthrospira_sp._DIHE_Q_AJ292340
            Arthrospira_sp._DIHE1_AJ292338
            'Arthrospira sp. EF-18A AJ292333'
            'Arthrospira sp. EF-2 AJ292332'
            Arthrospira_sp._FACHB438_AF329392
            Arthrospira_sp._FACHB439_AF329391
            Arthrospira_sp._KR2004_02
            Arthrospira_sp._KR2004_04
            Arthrospira_sp._KR2004_05
            Arthrospira_sp._KR2004_06
            Arthrospira_sp._KR2004_09
            Arthrospira_sp._KR2004_10
            Arthrospira_sp._KR2004_12
            Arthrospira_sp._KR2005_113
            Arthrospira_sp._KR2005_115
            Arthrospira_sp._KR2005_117
            Arthrospira_sp._KR2005_118
            Arthrospira_sp._OUQDS6_AF329393
            Arthrospira_sp._PCC_8005_X70769
            Arthrospira_sp._PCC_9108_AJ292329
            Arthrospira_sp._PCC_9223_AJ292335
            Arthrospira_sp._PD2002_02
            Arthrospira_sp._PD2002_03
            Arthrospira_sp._PD2002_04
            Arthrospira_sp._PD2002_06
            Arthrospira_sp._PD2002_07
            Arthrospira_sp._PD2002_08
            Arthrospira_sp._ROHRER_AJ292341
            'Arthrospira sp. SP-10 AJ292325'
            'Arthrospira sp. SP-16 AJ292326'
            Arthrospira_sp._TKF1_AY101599
            Arthrospira_sp._Titicaca_AJ292331
            Arthrospira_sp._X75044
            Phormidium_autumnale_UTCC_579_AM778721
            ;
END;

BEGIN TREES;
      TITLE Tb11215;
      LINK TAXA = M4952;
      TREE Fig._8 = [&R] ((((((((((((((Arthrospira_sp._AB2006_02,Arthrospira_maxima_AJ292323),(Arthrospira_sp._Titicaca_AJ292331,Arthrospira_fusiformis_AB2002_05_AY575927)),(Arthrospira_indica_PD1997_ram_AY575931,('Arthrospira sp. SP-16 AJ292326',Arthrospira_fusiformis_AB2002_01_AY575923))),Arthrospira_fusiformis_AB2002_02_AY575924),(Arthrospira_sp._KR2005_115,Arthrospira_fusiformis_AB2002_10_AY575928)),Arthrospira_sp._KR2005_118),(Arthrospira_sp._PD2002_08,(Arthrospira_sp._C1_AJ292330,('Arthrospira platensis Sp-2 DQ279768',(Arthrospira_fusiformis_AJ292321,Arthrospira_sp._DIHE1_AJ292338))))),(Arthrospira_sp._AB2006_01,'Arthrospira sp. SP-10 AJ292325')),(((((Arthrospira_sp._KR2005_113,Arthrospira_sp._TKF1_AY101599),Arthrospira_sp._ROHRER_AJ292341),'Arthrospira platensis str. Lefevre 1963 M-132-1 FJ798612'),Arthrospira_sp._DIHE_Q_AJ292340),((Arthrospira_sp._AB2002_38,'Arthrospira sp. EF-18A AJ292333'),((Arthrospira_sp._AB2006_03,Arthrospira_sp._KR2005_117),(Arthrospira_sp._3832_AJ292339,(Arthrospira_sp._AB2006_06,Arthrospira_fusiformis_AB2002_03_AY575925)))))),(Arthrospira_sp._PCC_9223_AJ292335,(Arthrospira_sp._AB2006_05,Arthrospira_fusiformis_AB2002_04_AY575926))),(Arthrospira_sp._AB2006_04,Arthrospira_fusiformis_AB2002_11_AY575929)),(Arthrospira_indica_PD1998_pus_AY575930,((((Arthrospira_sp._PD2002_07,Arthrospira_sp._PD2002_04),Arthrospira_sp._PD2002_03),Arthrospira_sp._PD2002_02),(Arthrospira_sp._PD2002_06,(Arthrospira_indica_AJ292336,(Arthrospira_sp._PCC_8005_X70769,Arthrospira_indica_PD2002_ana_AY575932)))))),('Arthrospira platensis Sp-7 EF432313',(Arthrospira_sp._AB2006_11,(Arthrospira_sp._KR2004_02,(Arthrospira_sp._KR2004_10,(Arthrospira_sp._KR2004_09,('Arthrospira platensis Sp-17 EF432319',(Arthrospira_sp._AB2006_15,(Arthrospira_sp._AB2006_13,('Arthrospira sp. EF-2 AJ292332',(Arthrospira_sp._AB2006_12,(Arthrospira_sp._KR2004_12,(Arthrospira_sp._AB2006_10,(Arthrospira_sp._FACHB439_AF329391,(Arthrospira_sp._KR2004_05,(Arthrospira_sp._PCC_9108_AJ292329,(Arthrospira_platensis_AJ292322,(Arthrospira_sp._AB2006_14,(Arthrospira_sp._OUQDS6_AF329393,(Arthrospira_sp._AB2006_08,(Arthrospira_sp._X75044,(Arthrospira_sp._AB2006_09,(Arthrospira_sp._COMPERE_86.79_AJ292327,(Arthrospira_sp._KR2004_04,(Arthrospira_platensis_AJ292337,('Arthrospira platensis Sp-1 AJ292324',(Arthrospira_sp._AB2006_16,(Arthrospira_sp._KR2004_06,(Arthrospira_fusiformis_AJ292328,(Arthrospira_indica_AJ292334,Arthrospira_sp._FACHB438_AF329392)))))))))))))))))))))))))))))),Phormidium_autumnale_UTCC_579_AM778721);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr6795]


END;