#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 26, 2024; 5:18 GMT

TreeBASE (cc) 1994-2008

Study reference:
Wang L., Sun X., Wei J., Guo L., & Lou J. 2014. A new endophytic fungus Neofabraea
illicii sp. nov. isolated from Illicium verum. Mycoscience, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S15318]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=51;
        TAXLABELS
            Ascocoryne_solitaria_HM152545
            Cryptosporiopsis_actinidiae_JN198440
            Cryptosporiopsis_brunnea_AF149074
            Cryptosporiopsis_caliginosa_GU973505
            Cryptosporiopsis_diversispora_AF141165
            Cryptosporiopsis_edgertonii_JN595853
            Cryptosporiopsis_ericae_AY442321
            Cryptosporiopsis_melanigena_AF141196
            Cryptosporiopsis_radicicola_AF141193
            Dermea_ariae_AF141158
            Dermea_cerasi_AF141159
            Dermea_hamamelidis_AF141157
            Dermea_padi_AF141160
            Dermea_prunastri_AF141162
            Dermea_viburni_AF141163
            Diplocarpon_mali_AB609189
            Diplocarpon_mespili_EF600984
            Diplocarpon_rosae_AB609192
            Helgardia_anguioides_AY266144
            Mollisia_fusca_AY259138
            Mollisia_minutella_EU314678
            Naevala_minutissima_AY853222
            Neofabraea_alba_AY064704
            Neofabraea_eucalypti_GQ303279
            Neofabraea_illicii_KF137635
            Neofabraea_illicii_KF137637
            Neofabraea_illicii_KF137638
            Neofabraea_krawtzewii_AF281364
            Neofabraea_malicorticis_AF141161
            Neofabraea_perennans_AF281395
            Oculimacula_acuformis_AY266146
            Oculimacula_yallundae_JF412009
            Pezicula_acericola_AF141198
            Pezicula_aurantiaca_AF141170
            Pezicula_carpinea_AF141197
            Pezicula_cinnamomea_AF141185
            Pezicula_corni_AF141182
            Pezicula_corticola_AF141179
            Pezicula_corylina_AF141176
            Pezicula_eucrita_AF141194
            Pezicula_frangulae_AF141183
            Pezicula_heterochroma_AF141167
            Pezicula_livida_AF141180
            Pezicula_ocellata_AF141181
            Pezicula_pruinosa_AF141188
            Pezicula_rubi_AF141177
            Pezicula_sporulosa_AF141166
            Pezicula_subcarnea_AF141171
            Pseudopeziza_medicaginis_EU729125
            Pyrenopeziza_brassicae_JX648200
            Scleropezicula_alnicola_AF141169
            ;
END;

BEGIN TREES;
      TITLE Neofabraea_illicii_ITS_P_MPCT;
      LINK TAXA = Taxa;
      TREE ITS_P_MPCT_Strict = [&R] ((Pseudopeziza_medicaginis_EU729125:0.23981049,(Pyrenopeziza_brassicae_JX648200:0.08781381,(Helgardia_anguioides_AY266144:0.01298579,(Oculimacula_acuformis_AY266146:0.00835002,Oculimacula_yallundae_JF412009:0.01088386):0.02476916):0.03746993):0.03734449):0.054785425,((Diplocarpon_mespili_EF600984:0.28569634,(Diplocarpon_rosae_AB609192:0.1869143,Diplocarpon_mali_AB609189:0.09698735):0.12986374):0.23340293,((Ascocoryne_solitaria_HM152545:0.26672933,(Naevala_minutissima_AY853222:0.26577018,(Mollisia_fusca_AY259138:0.14464995,Mollisia_minutella_EU314678:0.08947871):0.21578676):0.04088472):0.02874551,(Scleropezicula_alnicola_AF141169:0.23634277,(((Neofabraea_eucalypti_GQ303279:0.01743092,Cryptosporiopsis_caliginosa_GU973505:0.00782161):0.06187116,(Neofabraea_illicii_KF137635:1.0E-8,Neofabraea_illicii_KF137638:1.0E-8,Neofabraea_illicii_KF137637:1.0E-8):0.08497202):0.05267992,((Neofabraea_krawtzewii_AF281364:0.04789988,(Neofabraea_alba_AY064704:0.02465032,(Cryptosporiopsis_actinidiae_JN198440:0.01924271,(Neofabraea_malicorticis_AF141161:1.0E-8,Neofabraea_perennans_AF281395:1.0E-8):0.0128249):0.0132853):0.01170943):0.01751146,(Dermea_padi_AF141160:0.05571264,(Dermea_viburni_AF141163:0.04864349,Dermea_prunastri_AF141162:0.07747447,Dermea_cerasi_AF141159:0.1270103,(Dermea_ariae_AF141158:1.0E-8,Dermea_hamamelidis_AF141157:1.0E-8):0.05514579,(Pezicula_eucrita_AF141194:0.03062211,Cryptosporiopsis_melanigena_AF141196:0.00889965,Cryptosporiopsis_radicicola_AF141193:0.01469252,Cryptosporiopsis_brunnea_AF149074:0.01483941,Pezicula_aurantiaca_AF141170:0.02145824,Pezicula_heterochroma_AF141167:0.0151856,Cryptosporiopsis_ericae_AY442321:0.00918721,Pezicula_corylina_AF141176:0.04271486,Pezicula_corni_AF141182:0.03114005,Pezicula_subcarnea_AF141171:0.0515371,Pezicula_cinnamomea_AF141185:0.03305227,Pezicula_frangulae_AF141183:0.03388412,Pezicula_carpinea_AF141197:0.04388682,Pezicula_ocellata_AF141181:0.03151749,Cryptosporiopsis_edgertonii_JN595853:0.03006657,(Pezicula_livida_AF141180:1.0E-8,Pezicula_sporulosa_AF141166:1.0E-8):0.03666435,(Pezicula_pruinosa_AF141188:0.00897793,Pezicula_acericola_AF141198:0.02838924):0.01847844,(Cryptosporiopsis_diversispora_AF141165:0.01714488,(Pezicula_corticola_AF141179:0.02965316,Pezicula_rubi_AF141177:6.6751E-4):0.04259047):0.02652641):0.06156794):0.00914634):0.08227319):0.01448642):0.0290968):0.14278486):0.12355784):0.054785425);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70474]


END;