#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 16, 2024; 0:32 GMT

TreeBASE (cc) 1994-2008

Study reference:
Gazis R.O., Skaltsas D., & Chaverri P. 2014. Novel endophytic lineages of Tolypocladium
provide new insights into the ecology and evolution of Cordyceps-like fungi.
Mycologia, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S15407]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=60;
        TAXLABELS
            Chaunopycnis_alba
            Chaunopycnis_pustulata
            Elaphocordyceps_capitata
            Elaphocordyceps_fracta
            Elaphocordyceps_inegoensis
            Elaphocordyceps_japonica
            Elaphocordyceps_jezoensis
            Elaphocordyceps_longisegmentis
            Elaphocordyceps_ophioglossoides
            Elaphocordyceps_paradoxa
            Elaphocordyceps_subsessilis
            Ophiocordyceps_gracilis
            Ophiocordyceps_gracilis_2
            Tolypocladium_cylindrosporum
            Tolypocladium_geodes
            Tolypocladium_inflatum
            Tolypocladium_nubicola
            Tolypocladium_sp._IQ136
            Tolypocladium_sp._IQ158
            Tolypocladium_sp._IQ176
            Tolypocladium_sp._IQ177
            Tolypocladium_sp._IQ214
            Tolypocladium_sp._IQ249
            Tolypocladium_sp._IQ35
            Tolypocladium_sp._IQ45
            Tolypocladium_sp._LA100
            Tolypocladium_sp._LA108
            Tolypocladium_sp._LA196
            Tolypocladium_sp._LA264c
            Tolypocladium_sp._MS108
            Tolypocladium_sp._MS271
            Tolypocladium_sp._MS308
            Tolypocladium_sp._MS325
            Tolypocladium_sp._MS337
            Tolypocladium_sp._MS460
            Tolypocladium_sp._MS464
            Tolypocladium_sp._MS485
            Tolypocladium_sp._MS490
            Tolypocladium_sp._MS506
            Tolypocladium_sp._MS507
            Tolypocladium_sp._MS533
            Tolypocladium_sp._MS535
            Tolypocladium_sp._MS538
            Tolypocladium_sp._MS562
            Tolypocladium_sp._MX329
            Tolypocladium_sp._MX335
            Tolypocladium_sp._MX337
            Tolypocladium_sp._MX338
            Tolypocladium_sp._MX451
            Tolypocladium_sp._MX485
            Tolypocladium_sp._MX486
            Tolypocladium_sp._MX535
            Tolypocladium_sp._MX560
            Tolypocladium_sp._MX575
            Tolypocladium_sp._MX65
            Tolypocladium_sp._MX66
            Tolypocladium_sp._NHB52
            Tolypocladium_sp._NHB59
            Tolypocladium_sp._VPB140
            Tolypocladium_sp._VPB167
            ;
END;

BEGIN TREES;
      TITLE 'Cordyceps-like fungi Figure 1 (b) Consensus Bayes 8 loci 60 taxa';
      LINK TAXA = Taxa;
      TREE Consensus_tree_of_10000_trees = [&R] ((Ophiocordyceps_gracilis:0.0018202569605290804,Ophiocordyceps_gracilis_2:4.7089747786408897E-4):0.09834819050134756,(Elaphocordyceps_fracta:0.03632060703807484,Elaphocordyceps_japonica:0.022144828861225527,((Elaphocordyceps_capitata:0.02147919696028041,Elaphocordyceps_longisegmentis:0.030779363218948533):0.01956646182578671,(Elaphocordyceps_inegoensis:0.0094962028376283,(Elaphocordyceps_ophioglossoides:0.020682679137855427,(Elaphocordyceps_jezoensis:0.02885600345826902,Elaphocordyceps_paradoxa:0.0460582280443056,(Elaphocordyceps_subsessilis:0.0024573660412036996,(Tolypocladium_geodes:0.01882888211171081,(Tolypocladium_cylindrosporum:0.0028542720725358546,Tolypocladium_inflatum:0.003161269787663943,Tolypocladium_nubicola:0.007953659401549242):0.0015204995163531718):0.00872270776972473):0.017738506758710953,(Chaunopycnis_pustulata:0.036342648451120535,(Tolypocladium_sp._IQ136:0.00314263764980913,(Tolypocladium_sp._IQ45:0.017643925330783596,(Tolypocladium_sp._IQ214:0.0023677381404557415,(Tolypocladium_sp._IQ35:2.61503115163124E-4,(Tolypocladium_sp._MX337:3.000836544298828E-4,Tolypocladium_sp._MX338:2.4449236431996424E-4):4.737760486449369E-4):0.0014152415621263574):0.0024791871951064057):0.006201469034018686):0.024644017918209596,((Tolypocladium_sp._MS325:0.021883940092163934,(Tolypocladium_sp._MS506:0.008001364891756693,(((Chaunopycnis_alba:0.009221646974967341,Tolypocladium_sp._VPB167:0.009790685670742094):0.0015755301502510647,(Tolypocladium_sp._IQ177:8.923128725134196E-4,Tolypocladium_sp._VPB140:0.002279703660720997):0.00481613621706859):0.0017098393697838157,((Tolypocladium_sp._MS535:0.011590019206270707,(Tolypocladium_sp._MS108:0.0029444569200673316,Tolypocladium_sp._MS485:0.0026448920459124776):0.004474904398034089):0.0028504340656057762,(Tolypocladium_sp._IQ158:2.3774662667115637E-4,Tolypocladium_sp._IQ176:4.4948160904321945E-4,Tolypocladium_sp._MS271:2.3837741448776866E-4,Tolypocladium_sp._MS538:3.0569456847791445E-4,Tolypocladium_sp._NHB52:0.00610734566804059,(Tolypocladium_sp._IQ249:0.0011908905380682438,Tolypocladium_sp._MS490:2.756316649091677E-4):0.002270913549250995,(Tolypocladium_sp._MS562:2.549332604428096E-4,(Tolypocladium_sp._MS460:2.540743551914122E-4,Tolypocladium_sp._MS464:2.7490821533589276E-4):8.125803950091362E-4):4.417830389113563E-4):0.004655062369918083):0.0012014600178810978):0.005925986884068202):0.003222839402020515):0.002292974466907456,(((Tolypocladium_sp._MS507:0.025876824455838398,Tolypocladium_sp._MS533:0.018160623574961263):0.005191096633768071,(Tolypocladium_sp._MS308:7.380375232735393E-4,(Tolypocladium_sp._LA100:0.003358708419179989,Tolypocladium_sp._LA108:0.003943727218430954):0.0014828680153813117):0.005773398303735293):0.0025167504017018553,((Tolypocladium_sp._MX65:2.410071646034476E-4,Tolypocladium_sp._MX66:2.5491247958849916E-4,(Tolypocladium_sp._MX451:4.96967146018501E-4,Tolypocladium_sp._MX485:0.002494331164169565):2.4371955224227008E-4):0.018713709512749952,((Tolypocladium_sp._NHB59:0.00595701241517642,(Tolypocladium_sp._LA196:0.001992690873505953,Tolypocladium_sp._MS337:0.0018050545630412696):0.0025153352958603853):0.0026562555864949617,((Tolypocladium_sp._LA264c:0.007442993217002434,Tolypocladium_sp._MX335:0.0010324168765758323):0.0021411344156334433,(Tolypocladium_sp._MX535:3.2401649175168055E-4,((Tolypocladium_sp._MX329:0.00144913749912393,Tolypocladium_sp._MX560:3.461666746138696E-4):6.578739061610696E-4,(Tolypocladium_sp._MX486:9.261907362383658E-4,Tolypocladium_sp._MX575:0.0020156854814059127):7.390834354283558E-4):3.399983767471273E-4):5.543166321268868E-4):0.001773927464223179):0.005604281338772164):0.005142604343199562):0.004002574923792745):0.007254271067649004):0.007315153107241303):0.0024689208516876543):0.0012211397991982293):0.0017313722426165166):0.002642301785250851):0.09834819050134756):0.0;
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr70735]


END;