#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 23, 2024; 19:46 GMT

TreeBASE (cc) 1994-2008

Study reference:
Thongklang N., Nawaz R., Khalid A.N., Chen J., Hyde K.D., Zhao R., Parra L.A., Hanif
M., Moinard M., & Callac P. 2014. Morphological and molecular characterization
of three Agaricus species from tropical Asia (Pakistan, Thailand) reveals a new
group in section Xanthodermatei. Mycologia, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S15569]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=44;
        TAXLABELS
            Agaricus_aff._caribaeus_F2530_JF727856
            Agaricus_aff._volvatulus_F2767_JF727848
            Agaricus_bernardii_ARP173__AF432880
            Agaricus_biannulatus_LAPAG611_JF896229
            Agaricus_bisporiticus_CA910_KJ575609
            Agaricus_bisporiticus_CA929_KJ575610
            Agaricus_bisporiticus_LAH110811_KJ575608
            Agaricus_bisporiticus_LD2012111_KJ575611
            Agaricus_bitorquis_RWK1462_AF432898
            Agaricus_californicus_RWK1914_AY484679
            Agaricus_endoxanthus_ZRL3095_JF691554
            Agaricus_freirei_CA186_DQ185553
            Agaricus_fuscopunctatus_CA919_KJ755613
            Agaricus_fuscopunctatus_MFLU20120952_KJ575612
            Agaricus_fuscopunctatus_NTF61_JF514528
            Agaricus_gennadii_CA387_JF797188
            Agaricus_hondensis_RWK1938_DQ182513
            Agaricus_iodosmus_LAPAG245_DQ182518
            Agaricus_laskibarii_LAPAG115_AY943975
            Agaricus_menieri_CA162_DQ185567
            Agaricus_microvolvatulus_Grinling70109_JF514524
            Agaricus_microvolvatulus_LD2012171_KJ575615
            Agaricus_microvolvatulus_LD201271_KJ575614
            Agaricus_microvolvatulus_NTS117_KJ575618
            Agaricus_microvolvatulus_NTT38_KJ575617
            Agaricus_microvolvatulus_NTT84_KJ575616
            Agaricus_moelleri_CA209_DQ185561
            Agaricus_moelleroides_CA215_DQ185559
            Agaricus_murinocephalus_ZRL3044_JF691555
            Agaricus_parvitigrinus_CA158_AY899267
            Agaricus_pearsonii_PEAR83340_JF797186_
            Agaricus_phaeolepidotus_CA217_DQ185552
            Agaricus_placomyces_RWK1959_DQ182525
            Agaricus_pocillator_DUKEJ173_U85308
            Agaricus_pseudopratensis_LAPAG20_DQ182526
            Agaricus_sp._CA684_JF797187_
            Agaricus_sp._F2715_JF727847
            Agaricus_sp._NTF58_JF514527
            Agaricus_sp._NTS07_JF514533
            Agaricus_tlaxcalensis_MATA681_EU363033
            Agaricus_tollocanensis_MATA688_AY703913
            Agaricus_xanthodermulus_CA160_AY899273
            Agaricus_xanthodermus_CA15_AY899721
            Agaricus_xanthosarcus_Goossens5415_JF514523
            ;
END;

BEGIN TREES;
      TITLE 'Agaricus ITS1+2';
      LINK TAXA = Taxa;
      TREE Fig._1 = [&R] (((Agaricus_bitorquis_RWK1462_AF432898:0.047882,Agaricus_tlaxcalensis_MATA681_EU363033:0.043326)100:0.071557,(Agaricus_pearsonii_PEAR83340_JF797186_:0.073809,(Agaricus_sp._CA684_JF797187_:0.081263,(Agaricus_bernardii_ARP173__AF432880:0.081686,Agaricus_gennadii_CA387_JF797188:0.064051)81:0.019938)39:0.011627)59:0.009301)66:0.022309,(((Agaricus_hondensis_RWK1938_DQ182513:0.042796,Agaricus_freirei_CA186_DQ185553:0.021804)72:0.010346,(Agaricus_phaeolepidotus_CA217_DQ185552:0.053119,Agaricus_biannulatus_LAPAG611_JF896229:0.047679)51:0.004445)99:0.025639,((((Agaricus_parvitigrinus_CA158_AY899267:0.028285,(Agaricus_aff._caribaeus_F2530_JF727856:0.035434,(Agaricus_californicus_RWK1914_AY484679:0.053618,(Agaricus_xanthodermulus_CA160_AY899273:0.004631,Agaricus_laskibarii_LAPAG115_AY943975:0.006323)97:0.014705)65:0.007423)49:0.00369)95:0.023081,(Agaricus_sp._F2715_JF727847:0.040467,(Agaricus_tollocanensis_MATA688_AY703913:0.019511,Agaricus_pocillator_DUKEJ173_U85308:0.009392)96:0.018784)96:0.023)18:4.0E-6,((Agaricus_xanthosarcus_Goossens5415_JF514523:0.007274,(Agaricus_endoxanthus_ZRL3095_JF691554:0.009266,Agaricus_sp._NTS07_JF514533:0.012054)42:0.003928)100:0.03009,(Agaricus_iodosmus_LAPAG245_DQ182518:0.012627,((Agaricus_moelleroides_CA215_DQ185559:0.006268,(Agaricus_menieri_CA162_DQ185567:0.009376,(Agaricus_xanthodermus_CA15_AY899721:0.003132,Agaricus_moelleri_CA209_DQ185561:0.003154)33:0.003079)42:0.00317)18:0.003059,(Agaricus_placomyces_RWK1959_DQ182525:0.012591,(Agaricus_aff._volvatulus_F2767_JF727848:0.00949,Agaricus_sp._NTF58_JF514527:0.006328)100:0.036714)15:0.0)32:0.003158)46:0.009952)74:0.017941)95:0.04135,((Agaricus_pseudopratensis_LAPAG20_DQ182526:0.028978,(Agaricus_bisporiticus_CA929_KJ575610:0.0,Agaricus_bisporiticus_LAH110811_KJ575608:0.0,Agaricus_bisporiticus_CA910_KJ575609:0.0,Agaricus_bisporiticus_LD2012111_KJ575611:0.0)100:0.041221)37:0.003274,((Agaricus_microvolvatulus_Grinling70109_JF514524:0.0,Agaricus_microvolvatulus_LD2012171_KJ575615:0.0,Agaricus_microvolvatulus_LD201271_KJ575614:0.0,Agaricus_microvolvatulus_NTS117_KJ575618:0.0,Agaricus_microvolvatulus_NTT38_KJ575617:0.0,Agaricus_microvolvatulus_NTT84_KJ575616:0.0)100:0.027952,(Agaricus_murinocephalus_ZRL3044_JF691555:0.013553,(Agaricus_fuscopunctatus_CA919_KJ755613:0.0,Agaricus_fuscopunctatus_NTF61_JF514528:0.0,Agaricus_fuscopunctatus_MFLU20120952_KJ575612:0.0)98:0.013482)100:0.069891)67:0.013462)29:0.003962)56:0.014465):0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr72273]


END;