#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 09, 2024; 13:38 GMT

TreeBASE (cc) 1994-2008

Study reference:
Watanabe S., Mitsui K., Nakayama T., & Inouye I. 2006. Phylogenetic relationships
and taxonomy of sarcinoid green algae: Chlorosarcinopsis, Desmotetra, Sarcinochlamys
gen. nov., Neochlorosarcina, and Chlorosphaeropsis (Chlorophyceae, Chlorophyta).
Journal of Phycology, 42: 679-695.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1632]

BEGIN TAXA;
        TITLE  TaxonLabelSet12614;
        DIMENSIONS NTAX=68;
        TAXLABELS
            Ascochloris_multinucleata
            Characiosiphon_rivularis
            Chlamydomonas_applanata
            Chlamydomonas_asymmetrica
            Chlamydomonas_baca
            Chlamydomonas_dysosmos
            Chlamydomonas_moewusii
            Chlamydomonas_noctigama
            Chlamydomonas_oblonga
            Chlamydomonas_rapa
            Chlamydomonas_reinhardtii
            Chlamydopodium_vacuolatum
            Chlorococcum_diplobionticum
            Chlorococcum_echinozygotum
            Chlorococcum_hypnosporum
            Chlorococcum_oleofaciens
            Chlorogonium_elongatum
            Chlorogonium_euchlorum
            Chloromonas_augustae
            Chloromonas_rosae
            Chloromonas_rubrifilum
            Chlorosarcina_stigmatica_ASIBT105
            Chlorosarcina_stigmatica_T17
            Chlorosarcinopsis_aggregata
            Chlorosarcinopsis_arenicola
            Chlorosarcinopsis_bastropiensis
            Chlorosarcinopsis_communis
            Chlorosarcinopsis_dissociata
            Chlorosarcinopsis_eremi
            Chlorosarcinopsis_gelatinosa
            Chlorosarcinopsis_minor
            Chlorosarcinopsis_negevensis
            Chlorosarcinopsis_pseudominor
            Chlorosarcinopsis_sempervirens
            Chlorosarcinopsis_variabilis
            Chlorosphaeropsis_alveolata
            Chlsarcinpsis_delicata
            Desmotera_stigmatica
            Dunaliella_parva
            Ettlia_minuta
            Gongrosira_papuasica_UTEX1916
            Haematococcus_pluvialis
            Heterochlamydomonas_inaequalis
            Heterochlamydomonas_lobata
            Hormotila_blennista
            Lobocharacium_coloradoense
            Lobochlamys_culleus
            Lobochlamys_segnis_AJ410456
            Lobochlamys_segnis_AJ410464
            Neochlorosarcina_minuta
            Neochlosarcina_auxotrophica
            Neochlosarcina_deficiens
            Oogamochlamys_ettlii
            Oogamochlamys_gigantea
            Oogamochlamys_jimbabwiensis
            Paulschulzia_pseudovolvox
            Pleurastrum_insigne
            Polytoma_sp._U22933
            Protosiphon_botryoides
            Pteromonas_angulosa
            Spermatozopsis_similis
            Spongiochloris_spongiosa
            Tetracystis_aeria
            Tetraspora_sp.
            Trebouxia_asymmetrica
            Trebouxia_magna
            Volvox_carteri
            Wislouchiella_sp._U70591
            ;
END;

BEGIN TREES;
      TITLE Tb7973;
      LINK TAXA = TaxonLabelSet12614;
      TREE Fig._4 = [&R] (Trebouxia_magna,Trebouxia_asymmetrica,((((Chlamydomonas_reinhardtii,Volvox_carteri),(Paulschulzia_pseudovolvox,Tetraspora_sp.))Volvox_clade,((Chlorosarcinopsis_negevensis,(((Chlamydomonas_asymmetrica,Chlamydomonas_rapa),(Hormotila_blennista,Chlamydomonas_oblonga))Asymmetrica_clade,(Chlamydomonas_baca,((Chlorosarcinopsis_pseudominor,Chlorosarcinopsis_sempervirens),(Neochlosarcina_deficiens,(Neochlosarcina_auxotrophica,Neochlorosarcina_minuta)))Chlorophyceae_Group_D))),(Heterochlamydomonas_inaequalis,Heterochlamydomonas_lobata)Heterochlamydomonas))Chlorophyceae_Clade_IV,(Chlorosarcina_stigmatica_ASIBT105,((Lobochlamys_culleus,(Lobochlamys_segnis_AJ410464,Lobochlamys_segnis_AJ410456))Lobochlamys,(Oogamochlamys_jimbabwiensis,(Oogamochlamys_ettlii,Oogamochlamys_gigantea))Oogamochlamys))Chlorophyceae_Clade_III,((Spermatozopsis_similis,((Chlamydomonas_noctigama,(Chlamydomonas_moewusii,(Tetracystis_aeria,(Chlorococcum_echinozygotum,Chlorococcum_hypnosporum))))Tetracytis_Clade,((Lobocharacium_coloradoense,Characiosiphon_rivularis)Lobocharacium_Clade,((Wislouchiella_sp._U70591,Pteromonas_angulosa)Phacotaceae_Clade,((Haematococcus_pluvialis,((Chlorogonium_elongatum,Chlorogonium_euchlorum)Chlorogonium,((Chlorosarcinopsis_arenicola,(Chlorosarcinopsis_variabilis,Chlorosarcinopsis_eremi))Chlorophyceae_Group_A_Subgroup_A_c_,(Gongrosira_papuasica_UTEX1916,((Spongiochloris_spongiosa,(Chlorosphaeropsis_alveolata,Protosiphon_botryoides))Protosiphon_Clade,((Chlorosarcinopsis_bastropiensis,Chlorosarcinopsis_aggregata,Chlorosarcinopsis_dissociata)Chlorophyceae_Clade_Group_A_Subgroup_A_b,((Chlamydopodium_vacuolatum,(Chlorococcum_oleofaciens,Pleurastrum_insigne))Chlamydopodium_Clade,((Ettlia_minuta,Chlorosarcinopsis_minor),(Ascochloris_multinucleata,Chlorococcum_diplobionticum))Ascochloris_Clade))))))),(Dunaliella_parva,(Polytoma_sp._U22933,(Chlamydomonas_applanata,Chlamydomonas_dysosmos)))Dunaliella_parva_Clade)))))Chlorophyceae_Clade_I,((Chloromonas_rubrifilum,(Chloromonas_rosae,Chloromonas_augustae))Chloromonas,(Chlorosarcinopsis_gelatinosa,(Chlsarcinpsis_delicata,(Chlorosarcina_stigmatica_T17,Chlorosarcinopsis_communis,Desmotera_stigmatica))Chlorophyceae_Group_B))Chlorophyceae_Clade_II)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr770]


END;