#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 18, 2024; 18:52 GMT TreeBASE (cc) 1994-2008 Study reference: Liu F., Weir B.S., Damm U., Crous P.W., Wang Y., Liu B., Meng Z., & Cai L. 2015. Unravelling Colletotrichum species associated with Camellia, with the combined use of ApMat and GS loci to resolve species in the C. gloeosporioides complex. Persoonia, 35: 63-86. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S16761] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=159; TAXLABELS Colletotrichum_aenigma_ICMP_18608 Colletotrichum_aeschynomenes_ICMP_17673 Colletotrichum_alatae_ICMP_18122 Colletotrichum_alienum_ICMP_12071 Colletotrichum_alienum_LF322 Colletotrichum_aotearoa_ICMP_18537 Colletotrichum_asianum_ICMP_18580 Colletotrichum_camelliae_ICMP_10643 Colletotrichum_camelliae_ICMP_10646 Colletotrichum_camelliae_ICMP_18542 Colletotrichum_camelliae_LC1363 Colletotrichum_camelliae_LC1364 Colletotrichum_camelliae_LC1365 Colletotrichum_camelliae_LF152 Colletotrichum_camelliae_LF170 Colletotrichum_camelliae_LF206 Colletotrichum_camelliae_LF207 Colletotrichum_camelliae_LF209 Colletotrichum_camelliae_LF210 Colletotrichum_camelliae_LF212 Colletotrichum_camelliae_LF213 Colletotrichum_camelliae_LF214 Colletotrichum_camelliae_LF215 Colletotrichum_camelliae_LF216 Colletotrichum_camelliae_LF222 Colletotrichum_camelliae_LF223 Colletotrichum_camelliae_LF225 Colletotrichum_camelliae_LF226 Colletotrichum_camelliae_LF227 Colletotrichum_camelliae_LF262 Colletotrichum_camelliae_LF265 Colletotrichum_camelliae_LF278 Colletotrichum_camelliae_LF279 Colletotrichum_camelliae_LF284 Colletotrichum_camelliae_LF297 Colletotrichum_camelliae_LF299 Colletotrichum_camelliae_LF300 Colletotrichum_camelliae_LF303 Colletotrichum_camelliae_LF304 Colletotrichum_camelliae_LF308 Colletotrichum_camelliae_LF309 Colletotrichum_camelliae_LF310 Colletotrichum_camelliae_LF311 Colletotrichum_camelliae_LF315 Colletotrichum_camelliae_LF317 Colletotrichum_camelliae_LF319 Colletotrichum_camelliae_LF320 Colletotrichum_camelliae_LF321 Colletotrichum_camelliae_LF324 Colletotrichum_camelliae_LF325 Colletotrichum_camelliae_LF331 Colletotrichum_camelliae_LF336 Colletotrichum_camelliae_LF337 Colletotrichum_camelliae_LF338 Colletotrichum_camelliae_LF339 Colletotrichum_camelliae_LF350 Colletotrichum_camelliae_LF351 Colletotrichum_camelliae_LF355 Colletotrichum_camelliae_LF356 Colletotrichum_camelliae_LF367 Colletotrichum_camelliae_LF383 Colletotrichum_camelliae_LF491 Colletotrichum_camelliae_LF492 Colletotrichum_camelliae_LF496 Colletotrichum_camelliae_LF501 Colletotrichum_camelliae_LF504 Colletotrichum_camelliae_LF544 Colletotrichum_camelliae_LF545 Colletotrichum_camelliae_LF550 Colletotrichum_camelliae_LF552 Colletotrichum_camelliae_LF557 Colletotrichum_camelliae_LF572 Colletotrichum_camelliae_LF574 Colletotrichum_camelliae_LF577 Colletotrichum_camelliae_LF596 Colletotrichum_camelliae_LF601 Colletotrichum_camelliae_LF607 Colletotrichum_camelliae_LF609 Colletotrichum_camelliae_LF611 Colletotrichum_camelliae_LF617 Colletotrichum_camelliae_LF620 Colletotrichum_camelliae_LF623 Colletotrichum_camelliae_LF625 Colletotrichum_camelliae_LF630 Colletotrichum_camelliae_LF694 Colletotrichum_camelliae_LF715 Colletotrichum_camelliae_LF720 Colletotrichum_camelliae_LF734 Colletotrichum_camelliae_LF741 Colletotrichum_camelliae_LF742 Colletotrichum_camelliae_LF743 Colletotrichum_camelliae_LF744 Colletotrichum_camelliae_LF789 Colletotrichum_camelliae_LF790 Colletotrichum_clidemiae_ICMP_18658 Colletotrichum_cordylinicola_ICMP_18579 Colletotrichum_fructicola_ICMP_18581 Colletotrichum_fructicola_LF130 Colletotrichum_fructicola_LF131 Colletotrichum_fructicola_LF132 Colletotrichum_fructicola_LF133 Colletotrichum_fructicola_LF364 Colletotrichum_fructicola_LF376 Colletotrichum_fructicola_LF506 Colletotrichum_fructicola_LF510 Colletotrichum_fructicola_LF537 Colletotrichum_fructicola_LF590 Colletotrichum_fructicola_LF592 Colletotrichum_fructicola_LF606 Colletotrichum_fructicola_LF624 Colletotrichum_fructicola_LF639 Colletotrichum_fructicola_LF647 Colletotrichum_fructicola_LF649 Colletotrichum_fructicola_LF652 Colletotrichum_fructicola_LF655 Colletotrichum_fructicola_LF656 Colletotrichum_fructicola_LF670 Colletotrichum_fructicola_LF674 Colletotrichum_fructicola_LF681 Colletotrichum_fructicola_LF685 Colletotrichum_fructicola_LF686 Colletotrichum_fructicola_LF689 Colletotrichum_fructicola_LF690 Colletotrichum_fructicola_LF696 Colletotrichum_fructicola_LF716 Colletotrichum_fructicola_LF773 Colletotrichum_fructicola_LF797 Colletotrichum_fructicola_LF900 Colletotrichum_gloeosporioides_IMI_356878 Colletotrichum_gloeosporioides_LF318 Colletotrichum_gloeosporioides_LF604 Colletotrichum_gloeosporioides_LF916 Colletotrichum_gloeosporoides_LF534 Colletotrichum_henanense_LF238 Colletotrichum_horii_ICMP_17968 Colletotrichum_jiangxiense_LF488 Colletotrichum_jiangxiense_LF684 Colletotrichum_jiangxiense_LF687 Colletotrichum_kahawae_subsp_ciggaro_ICMP_18534 Colletotrichum_kahawae_subsp_kahawae_IMI_319418 Colletotrichum_musae_CBS_116870 Colletotrichum_nupharicola_CBS_470_96 Colletotrichum_nupharicola_CBS_472_96 Colletotrichum_psidii_CBS_145_29 Colletotrichum_queenslandicum_ICMP_1778 Colletotrichum_salsolae_ICMP_19051 Colletotrichum_siamense_CBS_125378 Colletotrichum_siamense_CBS_130420 Colletotrichum_siamense_ICMP_18578 Colletotrichum_siamense_LC0148 Colletotrichum_siamense_LC0149 Colletotrichum_siamense_LF139 Colletotrichum_siamense_LF148 Colletotrichum_siamense_LF149 Colletotrichum_siamense_LF182 Colletotrichum_theobromicola_CBS_124945 Colletotrichum_ti_ICMP_4832 Colletotrichum_tropicale_CBS_124949 Colletotrichum_xanthorrhoeae_BRIP_45094 ; END; BEGIN TREES; TITLE Colletotrichum_Fig._4_apmat_Gus; LINK TAXA = Taxa; TREE Fig._4 = [&R] (Colletotrichum_aenigma_ICMP_18608:0.215568,((Colletotrichum_alienum_ICMP_12071:0.1342632,Colletotrichum_alienum_LF322:0.1907719):0.04921482,((((Colletotrichum_fructicola_ICMP_18581:0.0574832,Colletotrichum_fructicola_LF652:0.01344321,Colletotrichum_fructicola_LF686:0.03112769):0.03427503,(Colletotrichum_fructicola_LF130:0.01272531,Colletotrichum_fructicola_LF131:0.07270513,Colletotrichum_fructicola_LF132:0.01318405,Colletotrichum_fructicola_LF133:0.01418444,Colletotrichum_fructicola_LF506:0.01393231,Colletotrichum_fructicola_LF510:0.01493107,Colletotrichum_fructicola_LF639:0.01414387,Colletotrichum_fructicola_LF685:0.1015043,Colletotrichum_fructicola_LF773:0.1955076):0.03263052,Colletotrichum_fructicola_LF376:0.01269489,(Colletotrichum_fructicola_LF537:0.01404723,Colletotrichum_fructicola_LF590:0.01347761):0.03215866,Colletotrichum_fructicola_LF606:0.01598903,Colletotrichum_fructicola_LF647:0.01281111,Colletotrichum_fructicola_LF670:0.0134649,Colletotrichum_fructicola_LF716:0.01403684):0.03215942,Colletotrichum_fructicola_LF364:0.01277369,Colletotrichum_fructicola_LF592:0.01560271,Colletotrichum_fructicola_LF624:0.03172795,(Colletotrichum_fructicola_LF649:0.01135283,Colletotrichum_fructicola_LF655:0.01728447,Colletotrichum_fructicola_LF656:0.01579314,Colletotrichum_fructicola_LF674:0.01447262,Colletotrichum_fructicola_LF696:0.03073056,Colletotrichum_fructicola_LF900:0.01446652):0.02951976,Colletotrichum_fructicola_LF681:0.01439053,Colletotrichum_fructicola_LF689:0.01323321,Colletotrichum_fructicola_LF690:0.01163949,Colletotrichum_fructicola_LF797:0.03385017):0.1863909,(Colletotrichum_nupharicola_CBS_470_96:0.02589264,Colletotrichum_nupharicola_CBS_472_96:0.03037516):0.2746521):0.04350426):0.1050116,((Colletotrichum_aeschynomenes_ICMP_17673:0.5764923,(((Colletotrichum_alatae_ICMP_18122:2.632225,((((Colletotrichum_aotearoa_ICMP_18537:0.5453093,Colletotrichum_ti_ICMP_4832:0.3955437):0.04163394,((((((((Colletotrichum_camelliae_ICMP_10643:0.01332804,Colletotrichum_camelliae_ICMP_18542:0.09126802):0.03344268,Colletotrichum_camelliae_ICMP_10646:0.01258497,Colletotrichum_camelliae_LF152:0.03392825,Colletotrichum_camelliae_LF170:0.01519022):0.06934945,(Colletotrichum_camelliae_LC1363:0.01185355,Colletotrichum_camelliae_LC1364:0.01086039,Colletotrichum_camelliae_LC1365:0.01288484,Colletotrichum_camelliae_LF206:0.01519925,Colletotrichum_camelliae_LF207:0.01576036,Colletotrichum_camelliae_LF209:0.01411,Colletotrichum_camelliae_LF210:0.0106056,Colletotrichum_camelliae_LF212:0.01003748,Colletotrichum_camelliae_LF213:0.01725501,(Colletotrichum_camelliae_LF214:0.01367497,Colletotrichum_camelliae_LF215:0.01467391,Colletotrichum_camelliae_LF216:0.01310111):0.03127764,Colletotrichum_camelliae_LF222:0.01619863,Colletotrichum_camelliae_LF223:0.01399285,Colletotrichum_camelliae_LF225:0.01174396,Colletotrichum_camelliae_LF226:0.01486435,Colletotrichum_camelliae_LF227:0.01217159,(Colletotrichum_camelliae_LF262:0.01448245,Colletotrichum_camelliae_LF265:0.01354308,Colletotrichum_camelliae_LF278:0.01635571,Colletotrichum_camelliae_LF279:0.01245453,Colletotrichum_camelliae_LF284:0.01621,Colletotrichum_camelliae_LF304:0.01247037,Colletotrichum_camelliae_LF308:0.01435996,Colletotrichum_camelliae_LF309:0.01527039,Colletotrichum_camelliae_LF310:0.01194825,Colletotrichum_camelliae_LF311:0.01339113,Colletotrichum_camelliae_LF315:0.01257291,Colletotrichum_camelliae_LF324:0.01491332,Colletotrichum_camelliae_LF325:0.01137454,Colletotrichum_camelliae_LF331:0.01469231,Colletotrichum_camelliae_LF336:0.01429688,Colletotrichum_camelliae_LF337:0.0110756,Colletotrichum_camelliae_LF338:0.01203907,Colletotrichum_camelliae_LF339:0.01286495,(Colletotrichum_camelliae_LF350:0.01235376,Colletotrichum_camelliae_LF351:0.0114651,Colletotrichum_camelliae_LF356:0.01371117):0.0337399,Colletotrichum_camelliae_LF355:0.01398459,Colletotrichum_camelliae_LF491:0.01546543,Colletotrichum_camelliae_LF492:0.01612294,Colletotrichum_camelliae_LF504:0.01364768,Colletotrichum_camelliae_LF544:0.01236098,Colletotrichum_camelliae_LF545:0.01219344,Colletotrichum_camelliae_LF550:0.01375462,Colletotrichum_camelliae_LF557:0.03603677,Colletotrichum_camelliae_LF574:0.01195576,Colletotrichum_camelliae_LF577:0.01222854,Colletotrichum_camelliae_LF596:0.01512916,Colletotrichum_camelliae_LF609:0.0152039,Colletotrichum_camelliae_LF611:0.0124188,Colletotrichum_camelliae_LF625:0.01199606,Colletotrichum_camelliae_LF630:0.0125409,Colletotrichum_camelliae_LF743:0.01444823,Colletotrichum_camelliae_LF789:0.01524022):0.05201948,Colletotrichum_camelliae_LF297:0.01120058,Colletotrichum_camelliae_LF299:0.01564994,Colletotrichum_camelliae_LF300:0.01457663,Colletotrichum_camelliae_LF496:0.01564043,Colletotrichum_camelliae_LF501:0.01364028,Colletotrichum_camelliae_LF552:0.01485989,Colletotrichum_camelliae_LF601:0.01642007,Colletotrichum_camelliae_LF607:0.01310817,Colletotrichum_camelliae_LF617:0.01388701,Colletotrichum_camelliae_LF620:0.01404375,Colletotrichum_camelliae_LF623:0.01219111,Colletotrichum_camelliae_LF694:0.01369134,Colletotrichum_camelliae_LF715:0.010409,Colletotrichum_camelliae_LF720:0.01326319,Colletotrichum_camelliae_LF734:0.01200825,Colletotrichum_camelliae_LF790:0.01376703):0.09260505):0.05536463,(Colletotrichum_camelliae_LF303:0.0120391,Colletotrichum_camelliae_LF317:0.01229268,Colletotrichum_camelliae_LF319:0.01234083,Colletotrichum_camelliae_LF320:0.01473062,Colletotrichum_camelliae_LF321:0.0123967,Colletotrichum_camelliae_LF367:0.01481249,Colletotrichum_camelliae_LF383:0.01194451,Colletotrichum_camelliae_LF572:0.01248898,Colletotrichum_camelliae_LF741:0.01404226,Colletotrichum_camelliae_LF742:0.01283518,Colletotrichum_camelliae_LF744:0.0151899):0.1175591):0.02320658,(Colletotrichum_kahawae_subsp_ciggaro_ICMP_18534:0.02758392,Colletotrichum_kahawae_subsp_kahawae_IMI_319418:0.05854119):0.1312102):0.1591492,Colletotrichum_clidemiae_ICMP_18658:0.3925232):0.07890941,(Colletotrichum_jiangxiense_LF488:0.01331781,Colletotrichum_jiangxiense_LF684:0.01452185,Colletotrichum_jiangxiense_LF687:0.01481334):0.1196372):0.09303483,Colletotrichum_cordylinicola_ICMP_18579:0.5407719,Colletotrichum_psidii_CBS_145_29:0.3366795):0.2101405):0.5852942,Colletotrichum_henanense_LF238:1.301501):0.535318,Colletotrichum_horii_ICMP_17968:1.442728,Colletotrichum_theobromicola_CBS_124945:3.110716,Colletotrichum_xanthorrhoeae_BRIP_45094:1.229724):0.2710147):0.2154874,(((Colletotrichum_gloeosporioides_IMI_356878:0.01095003,Colletotrichum_gloeosporoides_LF534:0.01475415):0.1404195,(Colletotrichum_gloeosporioides_LF318:0.02600731,Colletotrichum_gloeosporioides_LF916:0.0632474):0.1270536):0.03684087,Colletotrichum_gloeosporioides_LF604:0.1770826):0.8506402):0.376141,((Colletotrichum_asianum_ICMP_18580:0.594553,Colletotrichum_tropicale_CBS_124949:0.7890864):0.2203145,(Colletotrichum_queenslandicum_ICMP_1778:0.7549246,(Colletotrichum_salsolae_ICMP_19051:0.3883753,(Colletotrichum_siamense_CBS_125378:0.3979956,((Colletotrichum_siamense_CBS_130420:0.188614,Colletotrichum_siamense_ICMP_18578:0.2407455,(Colletotrichum_siamense_LC0148:0.01285861,Colletotrichum_siamense_LC0149:0.03437369):0.1254858):0.1099016,(Colletotrichum_siamense_LF139:0.2137942,(Colletotrichum_siamense_LF148:0.01424311,Colletotrichum_siamense_LF149:0.02983633,Colletotrichum_siamense_LF182:0.235344):0.1511134):0.15168):0.04950745):0.06740402):0.2816365):0.1075819):0.1567911):0.2602013):0.5031557,Colletotrichum_musae_CBS_116870:0.7648163):0.05192854); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr79990] END;