#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 17, 2024; 5:19 GMT

TreeBASE (cc) 1994-2008

Study reference:
Puig M., Ruz L., Montesinos E., Moragrega C., & Llorente I. 2014. Combined morphological
and molecular approach for identification of Stemphylium vesicarium inoculum
in pear orchards. Fungal Biology, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S14571]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=64;
        TAXLABELS
            Alternaria_alternata
            Pleospora_gigaspora
            Stemphylim_botryosum_CBS714.68
            Stemphylim_eturminium_CBS109845
            Stemphylim_eturmiunum
            Stemphylim_gracilariae_EPS56
            Stemphylim_sp._EPS118
            Stemphylim_sp._EPS146
            Stemphylim_sp._EPS39
            Stemphylim_sp._EPS40
            Stemphylim_sp._EPS51
            Stemphylim_sp._EPS55
            Stemphylim_sp._EPS70
            Stemphylim_vesicarium_ATCC18521
            Stemphylim_vesicarium_CBS311.92
            Stemphylim_vesicarium_EPS107
            Stemphylim_vesicarium_EPS110
            Stemphylim_vesicarium_EPS111
            Stemphylim_vesicarium_EPS119
            Stemphylim_vesicarium_EPS126
            Stemphylim_vesicarium_EPS127
            Stemphylim_vesicarium_EPS14
            Stemphylim_vesicarium_EPS141
            Stemphylim_vesicarium_EPS157
            Stemphylim_vesicarium_EPS26
            Stemphylim_vesicarium_EPS45
            Stemphylim_vesicarium_EPS47
            Stemphylim_vesicarium_EPS48
            Stemphylim_vesicarium_EPS49
            Stemphylim_vesicarium_EPS52
            Stemphylim_vesicarium_EPS54
            Stemphylim_vesicarium_EPS61
            Stemphylim_vesicarium_EPS65
            Stemphylim_vesicarium_EPS66
            Stemphylim_vesicarium_EPS76
            Stemphylim_vesicarium_EPS77
            Stemphylim_vesicarium_EPS80
            Stemphylim_vesicarium_EPS81
            Stemphylim_vesicarium_EPS96
            Stemphylim_vesicarium_Fr3906
            Stemphylim_vesicarium_H850
            Stemphylim_vesicarium_H852
            Stemphylim_vesicarium_H869
            Stemphylim_vesicarium_H890
            Stemphylium_alfalfae
            Stemphylium_astragali
            Stemphylium_astragali2
            Stemphylium_botryosum
            Stemphylium_callistephi
            Stemphylium_gracilariae
            Stemphylium_herbarum
            Stemphylium_lancipes
            Stemphylium_loti
            Stemphylium_lycopersici
            Stemphylium_majusculum
            Stemphylium_paludiscirpi
            Stemphylium_sarciniforme
            Stemphylium_sedicola
            Stemphylium_solani_strain
            Stemphylium_tomatonis
            Stemphylium_trifolii
            Stemphylium_triglochinicola
            Stemphylium_vesicarium
            Stemphylium_xanthosomatis
            ;
END;

BEGIN TREES;
      TITLE Stemphylium_vesicarium_inoculum_ITS;
      LINK TAXA = Taxa;
      TREE PAUP_1 = [&R] (Alternaria_alternata:0.051403355,((Stemphylium_loti:0.03064598,Stemphylium_sarciniforme:0.01748954):0.00713791,((Stemphylium_trifolii:0.00856535,(Stemphylium_triglochinicola:0.0041416,(Stemphylium_paludiscirpi:1.0E-8,(Stemphylim_sp._EPS118:1.0E-8,Stemphylim_sp._EPS146:0.00205803):0.00206703):0.00208633):0.0):1.0E-8,(((Stemphylium_lycopersici:1.0E-8,Stemphylium_xanthosomatis:1.0E-8):0.00865589,(Stemphylium_callistephi:0.00645543,(Stemphylium_lancipes:1.0E-8,Stemphylium_solani_strain:1.0E-8):1.0E-8):0.00214442):0.0020407,((Stemphylim_eturminium_CBS109845:1.0E-8,(Stemphylim_sp._EPS55:1.0E-8,((Stemphylim_botryosum_CBS714.68:1.0E-8,Stemphylium_botryosum:1.0E-8):0.00638692,(Stemphylim_sp._EPS70:1.0E-8,(Stemphylim_sp._EPS51:1.0E-8,(Stemphylim_sp._EPS40:1.0E-8,(Stemphylim_eturmiunum:1.0E-8,Stemphylim_sp._EPS39:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):4.8362794E-5):0.0):0.00206784,(Stemphylim_vesicarium_EPS61:1.0E-8,(Stemphylim_vesicarium_EPS81:1.0E-8,(Stemphylim_vesicarium_EPS96:1.0E-8,(Stemphylim_vesicarium_EPS77:1.0E-8,((Stemphylium_majusculum:1.0E-8,(Pleospora_gigaspora:1.0E-8,(Stemphylim_gracilariae_EPS56:1.0E-8,(Stemphylium_gracilariae:1.0E-8,(Stemphylium_astragali2:1.0E-8,(Stemphylium_astragali:1.0E-8,(Stemphylium_vesicarium:1.0E-8,(Stemphylium_tomatonis:1.0E-8,(Stemphylium_sedicola:1.0E-8,(Stemphylium_alfalfae:1.0E-8,Stemphylium_herbarum:1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.0):0.0):0.0):0.00203366):6.64257E-8):0.0):5.2952167E-5,(Stemphylim_vesicarium_H890:1.0E-8,(Stemphylim_vesicarium_Fr3906:1.0E-8,(Stemphylim_vesicarium_ATCC18521:1.0E-8,((Stemphylim_vesicarium_CBS311.92:1.0E-8,Stemphylim_vesicarium_EPS107:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS110:1.0E-8,Stemphylim_vesicarium_EPS111:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS119:1.0E-8,Stemphylim_vesicarium_EPS126:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS127:1.0E-8,Stemphylim_vesicarium_EPS14:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS141:1.0E-8,Stemphylim_vesicarium_EPS157:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS26:1.0E-8,Stemphylim_vesicarium_EPS45:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS47:1.0E-8,Stemphylim_vesicarium_EPS48:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS49:1.0E-8,Stemphylim_vesicarium_EPS52:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS54:1.0E-8,Stemphylim_vesicarium_EPS65:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS66:1.0E-8,Stemphylim_vesicarium_EPS76:1.0E-8):1.0E-8,((Stemphylim_vesicarium_EPS80:1.0E-8,Stemphylim_vesicarium_H850:1.0E-8):1.0E-8,(Stemphylim_vesicarium_H852:1.0E-8,Stemphylim_vesicarium_H869:1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):1.0E-8):0.00207014):1.0E-8):0.00629042):0.00685254):0.051403355);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr80714]


END;