#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 19, 2024; 6:36 GMT TreeBASE (cc) 1994-2008 Study reference: Simmons D.R., Kepler R.M., Rehner S.A., & Groden E. 2015. Phylogeny of Hirsutella species (Ophiocordycipitaceae) from the USA: remedying the paucity of Hirsutella sequence data. IMA Fungus, 6(2): 345-356. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S17863] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=86; TAXLABELS Cordyceps_gunnii_OSC_76404 Hirsutella_citriformis_ARSEF_0490 Hirsutella_citriformis_ARSEF_0591 Hirsutella_citriformis_ARSEF_1035 Hirsutella_citriformis_ARSEF_1446 Hirsutella_citriformis_ARSEF_2598 Hirsutella_cryptosclerotium_ARSEF_4517 Hirsutella_fusiformis_ARSEF_5474 Hirsutella_gigantea_ARSEF_30 Hirsutella_guyana_ARSEF_0878 Hirsutella_haptospora_ARSEF_2226 Hirsutella_illustris_ARSEF_5539 Hirsutella_kirchneri_ARSEF_5551 Hirsutella_lecaniicola_ARSEF_8888 Hirsutella_liboensis_ARSEF_9603 Hirsutella_necatrix_ARSEF_5549 Hirsutella_nodulosa_ARSEF_5473 Hirsutella_nr._haptospora_ARSEF_2228 Hirsutella_radiata_ARSEF_1369 Hirsutella_repens_nom._nud._ARSEF_2348 Hirsutella_rhossiliensis_ARSEF_2931 Hirsutella_rhossiliensis_ARSEF_3207 Hirsutella_rhossiliensis_ARSEF_3747 Hirsutella_rhossiliensis_ARSEF_3751 Hirsutella_satumaensis_ARSEF_0996 Hirsutella_sinensis_ARSEF_6282 Hirsutella_sp._ARSEF_7578 Hirsutella_sp._ARSEF_8378 Hirsutella_sp._NHJ_12525 Hirsutella_sp._OSC_128575 Hirsutella_stilbelliformis_var._myrmicarum_IMI_396397 Hirsutella_strigosa_ARSEF_2044 Hirsutella_strigosa_ARSEF_2197 Hirsutella_subramanianii_var._myrmicarum_IMI_396400 Hirsutella_subulata_ARSEF_2227 Hirsutella_thompsonii_ARSEF_0137 Hirsutella_thompsonii_ARSEF_0241 Hirsutella_thompsonii_ARSEF_0253 Hirsutella_thompsonii_ARSEF_0255 Hirsutella_thompsonii_ARSEF_0256 Hirsutella_thompsonii_ARSEF_0257 Hirsutella_thompsonii_ARSEF_0258 Hirsutella_thompsonii_ARSEF_0414 Hirsutella_thompsonii_ARSEF_1947 Hirsutella_thompsonii_ARSEF_2459 Hirsutella_thompsonii_ARSEF_2464 Hirsutella_thompsonii_ARSEF_2800 Hirsutella_thompsonii_ARSEF_3323 Hirsutella_thompsonii_ARSEF_3482 Hirsutella_thompsonii_ARSEF_9457 Hirsutella_thompsonii_var._synnematosa_ARSEF_5412 Hirsutella_thompsonii_var._vinacea_ARSEF_0254 Hirsutella_versicolor_ARSEF_1037 Nomuraea_atypicola_CBS_744.73 Ophiocordyceps_acicularis_OSC_110987 Ophiocordyceps_agriotidis_ARSEF_5692 Ophiocordyceps_aphodii_ARSEF_5498 Ophiocordyceps_brunneipunctata_OSC_128576 Ophiocordyceps_cf._acicularis_OSC128580 Ophiocordyceps_clavata_NBRC_106961 Ophiocordyceps_communis_NHJ_12581 Ophiocordyceps_communis_NHJ_12582 Ophiocordyceps_elongata_OSC_110989 Ophiocordyceps_entomorrhiza_KEW_53484 Ophiocordyceps_gracilis_EFCC_8572 Ophiocordyceps_heteropoda_EFCC_10125 Ophiocordyceps_irangiensis_OSC_128578 Ophiocordyceps_irangiensis_OSC_128579 Ophiocordyceps_kniphofioides Ophiocordyceps_konnoana_EFCC_7295 Ophiocordyceps_konnoana_EFCC_7315 Ophiocordyceps_longissima_EFCC_6814 Ophiocordyceps_melolonthae_OSC_110993 Ophiocordyceps_myrmicarum_ARSEF_11864 Ophiocordyceps_nigrealla_EFCC_9247 Ophiocordyceps_nutans_OSC_110994 Ophiocordyceps_pruinosa_NHJ_12994 Ophiocordyceps_pulvinata_TNS_F30044 Ophiocordyceps_ravenelii_OSC_110995 Ophiocordyceps_rhizoidea_NHJ_12522 Ophiocordyceps_sinensis_EFCC_7287 Ophiocordyceps_sobolifera_KEW_78842 Ophiocordyceps_sp._OSC_110997 Ophiocordyceps_stylophora_OSC_111000 Ophiocordyceps_unilateralis_OSC_128574 Ophiocordyceps_variabilis_ARSEF_5365 ; END; BEGIN TREES; TITLE 'Hirsutella species (Ophiocordycipitaceae) ARSEF S r t 041414 best of 500'; LINK TAXA = Taxa; TREE bestREP306 = [&R] (Cordyceps_gunnii_OSC_76404:0.09337608,(((((Ophiocordyceps_variabilis_ARSEF_5365:0.08173978,((Hirsutella_fusiformis_ARSEF_5474:0.00104014,Hirsutella_radiata_ARSEF_1369:0.00125849):0.04292586,((Hirsutella_gigantea_ARSEF_30:0.00261071,Ophiocordyceps_elongata_OSC_110989:0.00236586):0.03497652,(Hirsutella_sp._ARSEF_8378:0.05184916,((Hirsutella_citriformis_ARSEF_0591:1.0E-8,Hirsutella_citriformis_ARSEF_0490:1.0E-8):0.00292057,(Hirsutella_citriformis_ARSEF_2598:0.00236809,(Hirsutella_citriformis_ARSEF_1446:1.0E-8,Hirsutella_citriformis_ARSEF_1035:1.0E-8):3.7243E-4):0.00289741):0.028866):0.02053687):0.00836222):0.02735015):0.01186907,(((Ophiocordyceps_pulvinata_TNS_F30044:0.05537381,(Ophiocordyceps_sp._OSC_110997:0.09026376,Ophiocordyceps_unilateralis_OSC_128574:0.052308):0.01466588):0.06667315,(Ophiocordyceps_kniphofioides:0.0348591,(Hirsutella_stilbelliformis_var._myrmicarum_IMI_396397:0.03326915,Hirsutella_sp._ARSEF_7578:0.01070693):0.02744021):0.03310799):0.01572285,(Hirsutella_subramanianii_var._myrmicarum_IMI_396400:0.05247346,Ophiocordyceps_myrmicarum_ARSEF_11864:0.06327544):0.01466012):0.00663871):0.0029572,(((Ophiocordyceps_brunneipunctata_OSC_128576:0.0771183,(Ophiocordyceps_sobolifera_KEW_78842:0.02543738,Ophiocordyceps_longissima_EFCC_6814:0.03195505):0.01731289):0.02865194,Ophiocordyceps_aphodii_ARSEF_5498:0.10557855):0.02760041,(Ophiocordyceps_nutans_OSC_110994:0.11545444,(Ophiocordyceps_irangiensis_OSC_128578:0.00976267,Ophiocordyceps_irangiensis_OSC_128579:0.03377843):0.07637137):0.11311502):0.01503815):0.00585659,((((((((Hirsutella_rhossiliensis_ARSEF_3207:4.5428E-4,Hirsutella_nr._haptospora_ARSEF_2228:1.0E-8,Hirsutella_rhossiliensis_ARSEF_2931:4.5783E-4):4.5502E-4,Hirsutella_rhossiliensis_ARSEF_3751:1.0E-8,Hirsutella_rhossiliensis_ARSEF_3747:4.5699E-4):0.02084509,((((Hirsutella_kirchneri_ARSEF_5551:0.01743208,Hirsutella_repens_nom._nud._ARSEF_2348:0.05022443):0.01440757,(Hirsutella_strigosa_ARSEF_2197:1.0E-8,Hirsutella_strigosa_ARSEF_2044:1.0E-8):0.0741312):0.01805166,(Hirsutella_illustris_ARSEF_5539:0.02023264,(Hirsutella_sinensis_ARSEF_6282:0.00253714,Ophiocordyceps_sinensis_EFCC_7287:0.00262201):0.01947493):0.01324597):0.00843168,(Ophiocordyceps_stylophora_OSC_111000:0.02916802,Ophiocordyceps_acicularis_OSC_110987:0.05229912):0.00415562):0.00800979):0.00490608,Hirsutella_lecaniicola_ARSEF_8888:0.04177006):0.00708303,((Hirsutella_sp._OSC_128575:4.2101E-4,Hirsutella_sp._NHJ_12525:1.0E-8):0.08665714,((Hirsutella_haptospora_ARSEF_2226:0.05903183,(Hirsutella_guyana_ARSEF_0878:0.03864292,Ophiocordyceps_pruinosa_NHJ_12994:0.03747948):0.04208648):0.02240372,Hirsutella_versicolor_ARSEF_1037:0.1329283):0.00710311):0.0078735):0.00880319,(Ophiocordyceps_agriotidis_ARSEF_5692:0.10766038,(((Hirsutella_liboensis_ARSEF_9603:1.0E-8,Ophiocordyceps_cf._acicularis_OSC128580:1.0E-8):0.00445734,(Hirsutella_satumaensis_ARSEF_0996:1.0E-8,Hirsutella_nodulosa_ARSEF_5473:1.0E-8):0.00275698):0.0011729,Hirsutella_subulata_ARSEF_2227:0.00523064):0.06572366):0.01601286):0.03577697,(((Hirsutella_necatrix_ARSEF_5549:0.03408681,Hirsutella_thompsonii_var._synnematosa_ARSEF_5412:1.0E-8,(Hirsutella_thompsonii_ARSEF_0256:0.00250931,((Hirsutella_thompsonii_ARSEF_0257:1.0E-8,Hirsutella_thompsonii_ARSEF_0414:1.0E-8):0.01369642,(Hirsutella_thompsonii_ARSEF_1947:0.00459056,((Hirsutella_thompsonii_ARSEF_3482:1.0E-8,Hirsutella_thompsonii_ARSEF_9457:1.0E-8,Hirsutella_thompsonii_ARSEF_3323:1.0E-8):0.00107616,(Hirsutella_thompsonii_ARSEF_0241:1.0E-8,Hirsutella_thompsonii_ARSEF_0137:1.0E-8,Hirsutella_thompsonii_ARSEF_0253:1.0E-8,((Hirsutella_thompsonii_ARSEF_2459:1.0E-8,Hirsutella_thompsonii_ARSEF_0255:1.0E-8):0.00379625,Hirsutella_thompsonii_var._vinacea_ARSEF_0254:0.0013945):9.0304E-4,Hirsutella_thompsonii_ARSEF_2464:1.0E-8):0.00322307):0.00391382):0.00208138):0.00103412):0.03279142):0.0091046,((Hirsutella_thompsonii_ARSEF_0258:0.03334043,Hirsutella_cryptosclerotium_ARSEF_4517:0.05043406):0.01980573,Hirsutella_thompsonii_ARSEF_2800:0.05359525):0.0075325):0.01351212,(Ophiocordyceps_communis_NHJ_12581:0.00591533,Ophiocordyceps_communis_NHJ_12582:0.02501971):0.09056595):0.0350575):0.00922499,Ophiocordyceps_rhizoidea_NHJ_12522:0.0770585):0.01323338):0.00237791,(Ophiocordyceps_entomorrhiza_KEW_53484:0.06339027,(Ophiocordyceps_melolonthae_OSC_110993:0.05473388,((Ophiocordyceps_heteropoda_EFCC_10125:0.04390506,Ophiocordyceps_gracilis_EFCC_8572:0.08013219):0.00987393,(Ophiocordyceps_clavata_NBRC_106961:0.1002634,((Ophiocordyceps_konnoana_EFCC_7315:0.006238,Ophiocordyceps_konnoana_EFCC_7295:1.0E-8):0.06720227,(Ophiocordyceps_nigrealla_EFCC_9247:0.00971059,Ophiocordyceps_ravenelii_OSC_110995:0.01868479):0.0790076):0.01585773):0.01616679):0.0035149):0.0187638):0.0150449):0.02991391,Nomuraea_atypicola_CBS_744.73:0.06846237); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr88756] END;