#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 11, 2024; 9:36 GMT

TreeBASE (cc) 1994-2008

Study reference:
Kovalchuk A., Kohler A., Lee Y., Martin F., & Asiegbu F.O. 2015. Diversity and evolution
of ABC proteins in mycorrhiza-forming fungi. BMC Evolutionary Biology, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S17878]

BEGIN TAXA;
        TITLE  Untitled_Block_of_Taxa;
        DIMENSIONS NTAX=43;
        TAXLABELS
            Amanita_muscaria_AmamuABCA1.1
            Aspergillus_nidulans_ANIG_08812
            Botryotinia_fuckeliana_BC1G_11159
            Botryotinia_fuckeliana_BC1G_13151
            Cenococcum_geophilum_CengeABCA1.1
            Choiromyces_venosus_ChoveABCA1.1
            Coniophora_puteana_ConpuABCA1.1a
            Coniophora_puteana_ConpuABCA1.1b
            Coprinopsis_cinerea_CC1G_00682
            Cortinarius_glaucopus_CorglABCA1.1
            Hebeloma_cylindrosporum_HebcyABCA1.1a
            Hebeloma_cylindrosporum_HebcyABCA1.1b
            Hebeloma_cylindrosporum_HebcyABCA1.1c
            Laccaria_amethystina_LacamABCA1.1
            Laccaria_bicolor_LacbiABCA1.1
            Meliniomyces_bicolor_MelbiABCA1.1a
            Meliniomyces_bicolor_MelbiABCA1.1b
            Meliniomyces_bicolor_MelbiABCA1.2
            Meliniomyces_variabilis_MelvaABCA1.1a
            Meliniomyces_variabilis_MelvaABCA1.1b
            Meliniomyces_variabilis_MelvaABCA1.2
            Oidiodendron_maius_OidmaABCA1.1a
            Oidiodendron_maius_OidmaABCA1.1b
            Oidiodendron_maius_OidmaABCA1.1c
            Oidiodendron_maius_OidmaABCA1.2
            Paxillus_involutus_PaxinABCA1.1
            Paxillus_rubicundus_PaxruABCA1.1
            Phaeosphaeria_nodorum_SNOG_01792
            Phaeosphaeria_nodorum_SNOG_03422
            Piloderma_croceum_PilcrABCA1.1a
            Piloderma_croceum_PilcrABCA1.1b
            Piriformospora_indica_PirinABCA1.1
            Pyrenophora_tritici_repentis_PTRG_02757
            Schizophyllum_commune_SchcoABCA1.1
            Sclerotinia_sclerotiorum_SS1G_12070
            Sebacina_vermispora_SebveABCA1.1
            Serpula_lacrymans_SerlaABCA1.1
            Suillus_luteus_SuiluABCA1.1
            Terfezia_boudieri_TerboABCA1.1
            Tricholoma_matsutake_TrimaABCA1.1
            Tuber_melanosporum_TurmeABCA1.1
            Tulasnella_calospora_TulcaABCA1.1
            Ustilago_maydis_UM03454
            ;
END;

BEGIN TREES;
      TITLE 'Mycorrhiza-forming fungi ABC-A(2)a';
      LINK TAXA = Untitled_Block_of_Taxa;
      TREE NJ = [&R] (((((((((((((((Cortinarius_glaucopus_CorglABCA1.1:0.1515411,Hebeloma_cylindrosporum_HebcyABCA1.1a:0.1538915)0.5120:0.00554224,Hebeloma_cylindrosporum_HebcyABCA1.1b:0.24869909)0.9900:0.02921325,Coprinopsis_cinerea_CC1G_00682:0.20367147)0.4580:0.00555356,(Laccaria_bicolor_LacbiABCA1.1:0.02084462,Laccaria_amethystina_LacamABCA1.1:0.02441858)1.0000:0.11622037)0.9200:0.0159333,Tricholoma_matsutake_TrimaABCA1.1:0.15720584)0.5980:0.00659484,Amanita_muscaria_AmamuABCA1.1:0.25538452)0.6120:0.01135846,(Piloderma_croceum_PilcrABCA1.1a:0.1553931,(Coniophora_puteana_ConpuABCA1.1a:0.13649006,(Serpula_lacrymans_SerlaABCA1.1:0.10240854,(Suillus_luteus_SuiluABCA1.1:0.11125397,(Paxillus_involutus_PaxinABCA1.1:0.0254579,Paxillus_rubicundus_PaxruABCA1.1:0.03708546)1.0000:0.08295308)0.9700:0.01707534)0.7580:0.00633669)1.0000:0.03979568)0.9980:0.02607888)0.7540:0.01111794,Schizophyllum_commune_SchcoABCA1.1:0.26633877)0.9940:0.02487673,Piloderma_croceum_PilcrABCA1.1b:0.30389795)0.9780:0.03299837,Coniophora_puteana_ConpuABCA1.1b:0.37811738)0.6380:0.0119342,Hebeloma_cylindrosporum_HebcyABCA1.1c:0.41088223)0.7060:0.01981605,(Piriformospora_indica_PirinABCA1.1:0.14461385,Sebacina_vermispora_SebveABCA1.1:0.13453332)1.0000:0.19445974)1.0000:0.04714575,Tulasnella_calospora_TulcaABCA1.1:0.36904289)1.0000:0.10731558,Ustilago_maydis_UM03454:0.51754572)1.0000:0.10243572,((((Meliniomyces_bicolor_MelbiABCA1.2:0.10656528,Meliniomyces_variabilis_MelvaABCA1.2:0.10344121)1.0000:0.14236235,Oidiodendron_maius_OidmaABCA1.2:0.24493852)1.0000:0.10973368,Botryotinia_fuckeliana_BC1G_11159:0.39752807)1.0000:0.28055268,((Oidiodendron_maius_OidmaABCA1.1c:0.30816308,Meliniomyces_bicolor_MelbiABCA1.1b:0.29737209)1.0000:0.174276,((Phaeosphaeria_nodorum_SNOG_01792:0.52258807,Oidiodendron_maius_OidmaABCA1.1b:0.46233511)0.7300:0.01474521,(((Tuber_melanosporum_TurmeABCA1.1:0.0672928,Choiromyces_venosus_ChoveABCA1.1:0.06054057)1.0000:0.22844652,Terfezia_boudieri_TerboABCA1.1:0.26312146)0.9940:0.06047599,((Pyrenophora_tritici_repentis_PTRG_02757:0.08072196,Phaeosphaeria_nodorum_SNOG_03422:0.07521731)1.0000:0.26056168,(((Meliniomyces_bicolor_MelbiABCA1.1a:0.05433764,Meliniomyces_variabilis_MelvaABCA1.1b:0.05810635)1.0000:0.21259387,Cenococcum_geophilum_CengeABCA1.1:0.26476054)1.0000:0.10977064,(Aspergillus_nidulans_ANIG_08812:0.28937059,(Oidiodendron_maius_OidmaABCA1.1a:0.14704365,(Meliniomyces_variabilis_MelvaABCA1.1a:0.12104734,(Sclerotinia_sclerotiorum_SS1G_12070:0.05379897,Botryotinia_fuckeliana_BC1G_13151:0.07452898)1.0000:0.06165689)0.5180:0.01293585)1.0000:0.13967201)0.6420:0.02103264)0.8620:0.02583493)0.5720:0.01453936)1.0000:0.0510089)0.5480:0.00831085)0.9620:0.03521789)1.0000:0.00951458);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr88796]


END;