#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 17, 2024; 19:39 GMT

TreeBASE (cc) 1994-2008

Study reference:
Sant'anna F.H., Lebedinsky A.V., Sokolova T.G., Robb F.T., & Gonzalez J.M. 2015.
Analysis of three genomes within the thermophilic bacterial species Caldanaerobacter
subterraneus with a focus on carbon monoxide dehydrogenase evolution and hydrolase
diversity. BMC Genomics, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S18113]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=10;
        TAXLABELS
            'Aciduliprofundum boonei YP_003482748.1'
            'Aciduliprofundum sp. YP_007246715.1'
            Beggiatoa_sp._EDN67260.1
            'Caldanaerobacter subterraneus yonseiensis_ERM91259.1'
            'Caloramator australicus WP_008908962.1'
            Thermoanaerobacter_ethanolicus_EGD52031.1
            Thermoanaerobacter_siderophilus_EIW00258.1
            Thermoanaerobacter_thermohydrosulfuricus_EMT39651.1
            'Thermoanaerobacter wiegelii YP_004818843.1'
            'Thermobrachium celere WP_018663227.1'
            ;
END;

BEGIN TREES;
      TITLE MbxL_phylogeny;
      LINK TAXA = Taxa;
      TREE HyfI_ML = [&R] (((((Thermoanaerobacter_ethanolicus_EGD52031.1:1.0E-6,'Thermoanaerobacter wiegelii YP_004818843.1':1.0E-6)0.0000:1.0E-6,Thermoanaerobacter_thermohydrosulfuricus_EMT39651.1:1.0E-6)0.8940:0.009189,(Thermoanaerobacter_siderophilus_EIW00258.1:1.0E-6,'Caldanaerobacter subterraneus yonseiensis_ERM91259.1':0.002783)0.8770:0.007625)0.8260:0.023206,('Thermobrachium celere WP_018663227.1':0.052001,'Caloramator australicus WP_008908962.1':0.038832)0.9280:0.039039)1.0000:0.407479,(Beggiatoa_sp._EDN67260.1:0.43911,('Aciduliprofundum sp. YP_007246715.1':0.081739,'Aciduliprofundum boonei YP_003482748.1':0.086651)0.9990:0.339037)1.0000:0.059409)root;
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr89882]


END;