#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 18, 2024; 2:01 GMT

TreeBASE (cc) 1994-2008

Study reference:
Swain T.D. 2010. Evolutionary transitions in symbioses: dramatic reductions in bathymetric
and geographic ranges of Zoanthidea coincide with loss of symbioses with
invertebrates. Molecular Ecology, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S10492]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=71;
        TAXLABELS
            Corallizoanthus_tsukaharai
            Edwardsiid_sp_.BAR.
            Edwardsiid_sp_.CUR.
            Epizoanthus_aff_arenaceus_.HI.
            Epizoanthus_aff_illoricatus
            Epizoanthus_aff_tsukaharai_.CA.
            Epizoanthus_aff_tsukaharai_.NZ.
            Epizoanthus_californicus
            Epizoanthus_cf_arenaceus
            Epizoanthus_cf_balanorum
            Epizoanthus_cf_ramosus
            Epizoanthus_cutressi
            Epizoanthus_illoricatus
            Epizoanthus_incrustatus
            Epizoanthus_minutus
            Epizoanthus_paguricola
            Epizoanthus_patagonichus
            Epizoanthus_scotinus
            Gerardia_savaglia
            Isozoanthus_antumbrosus
            Isozoanthus_cf_giganteus
            Isozoanthus_giganteus
            Mesozoanthus_fossii_.1.
            Mesozoanthus_fossii_.3.
            Palythoa_aff_caesia
            Palythoa_aff_mutuki
            Palythoa_aff_sakurajimensis
            Palythoa_cf_grandis
            Palythoa_heliodiscus
            Palythoa_mutuki
            Palythoa_sp_.289.
            Palythoa_tuberculosa
            Parazoanthid_sp_.CORSARO.
            Parazoanthid_sp_.Cape_Verde.
            Parazoanthid_sp_.EBISCO.
            Parazoanthid_sp_.M2.
            Parazoanthid_sp_.NC3.
            Parazoanthid_sp_.Principe.
            Parazoanthid_sp_.yellow_polyp.
            Parazoanthus_aff_catenularis_.SEN.
            Parazoanthus_aff_juanfernandezii_.CA.
            Parazoanthus_aff_juanfernandezii_.FRA.
            Parazoanthus_aff_parasiticus_.MAD.
            Parazoanthus_aff_parasiticus_.NCd.
            Parazoanthus_aff_parasiticus_.NCs.
            Parazoanthus_aff_parasiticus_.NIP.
            Parazoanthus_aff_parasiticus_.SUL.
            Parazoanthus_aff_swiftii_.GAL.
            Parazoanthus_aff_swiftii_.Nur.
            Parazoanthus_aff_swiftii_.Sal.
            Parazoanthus_aff_tunicans_.SUL.
            Parazoanthus_anguicomus
            Parazoanthus_axinellae
            Parazoanthus_capensis
            Parazoanthus_catenularis
            Parazoanthus_cf_gracilis_.NC1.
            Parazoanthus_cf_gracilis_.NC2.
            Parazoanthus_gracilis
            Parazoanthus_juanfernandezii
            Parazoanthus_lucificum
            Parazoanthus_parasiticus
            Parazoanthus_puertoricense
            Parazoanthus_sp_.G1.
            Parazoanthus_sp_.SUL5.
            Parazoanthus_swiftii
            Parazoanthus_tunicans
            Sphenopus_marsupialis
            Zoanthus_gigantus
            Zoanthus_kuroshio
            Zoanthus_pulchellus
            Zoanthus_vietnamensis
            ;
END;

BEGIN TREES;
      TITLE Nuclear_71_taxa_TB;
      LINK TAXA = Taxa;
      TREE Nuclear_only = [&R] ((((Isozoanthus_cf_giganteus,Isozoanthus_giganteus),((Epizoanthus_aff_arenaceus_.HI.,((Epizoanthus_cf_balanorum,(Epizoanthus_cf_ramosus,Epizoanthus_cf_arenaceus)),(Epizoanthus_incrustatus,(Epizoanthus_scotinus,Epizoanthus_paguricola)))),(Epizoanthus_illoricatus,Epizoanthus_aff_illoricatus))),(((((Isozoanthus_antumbrosus,(Parazoanthus_cf_gracilis_.NC1.,(Parazoanthus_gracilis,Parazoanthus_cf_gracilis_.NC2.))),(Parazoanthus_tunicans,Parazoanthus_aff_tunicans_.SUL.)),(Parazoanthid_sp_.yellow_polyp.,(Epizoanthus_patagonichus,(Epizoanthus_californicus,Epizoanthus_minutus)))),(((Sphenopus_marsupialis,(Palythoa_aff_sakurajimensis,((Palythoa_aff_mutuki,Palythoa_mutuki),((Palythoa_sp_.289.,Palythoa_tuberculosa),Palythoa_aff_caesia)))),((Zoanthus_gigantus,((Zoanthus_vietnamensis,Zoanthus_kuroshio),Zoanthus_pulchellus)),Palythoa_heliodiscus)),Palythoa_cf_grandis)),((Mesozoanthus_fossii_.1.,Mesozoanthus_fossii_.3.),((((Parazoanthid_sp_.Cape_Verde.,Parazoanthid_sp_.Principe.),(Parazoanthus_sp_.G1.,Parazoanthid_sp_.M2.)),(Parazoanthid_sp_.EBISCO.,(Parazoanthid_sp_.CORSARO.,Parazoanthid_sp_.NC3.))),((Corallizoanthus_tsukaharai,(Epizoanthus_aff_tsukaharai_.CA.,((Gerardia_savaglia,Parazoanthus_lucificum),Epizoanthus_aff_tsukaharai_.NZ.))),(((Parazoanthus_catenularis,(Parazoanthus_puertoricense,Parazoanthus_sp_.SUL5.)),Epizoanthus_cutressi),((((Parazoanthus_parasiticus,(Parazoanthus_aff_parasiticus_.MAD.,(Parazoanthus_aff_parasiticus_.SUL.,Parazoanthus_aff_parasiticus_.NCd.))),Parazoanthus_aff_catenularis_.SEN.),(Parazoanthus_aff_parasiticus_.NIP.,Parazoanthus_aff_parasiticus_.NCs.)),(((Parazoanthus_capensis,(Parazoanthus_swiftii,(Parazoanthus_aff_swiftii_.Nur.,(Parazoanthus_aff_swiftii_.GAL.,Parazoanthus_aff_swiftii_.Sal.)))),(Parazoanthus_anguicomus,Parazoanthus_axinellae)),((Parazoanthus_aff_juanfernandezii_.CA.,Parazoanthus_juanfernandezii),Parazoanthus_aff_juanfernandezii_.FRA.))))))))),(Edwardsiid_sp_.BAR.,Edwardsiid_sp_.CUR.));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr9096]


END;