#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 19, 2024; 23:12 GMT

TreeBASE (cc) 1994-2008

Study reference:
Leacock P.R., Riddell J., Wilson A., Zhang R., Chen N., & Mueller G.M. 2016. Cantharellus
chicagoensis sp. nov. is confirmed by molecular and morphological analysis
as a new yellow chanterelle in midwestern United States. Mycologia, 108(5):
765-772.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S18405]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=40;
        TAXLABELS
            Cantharellus_aff_roseocanus_KP639204
            Cantharellus_altipes_JN944018_
            Cantharellus_amethysteus_JN944020__
            Cantharellus_appalachiensis_HQ386220_
            Cantharellus_appalachiensis_HQ416694_
            Cantharellus_appalachiensis_HQ416695_
            Cantharellus_californicus_DQ974688_
            Cantharellus_cascadensis_AY041180
            Cantharellus_cascadensis_AY041181
            Cantharellus_chicagoensis_KP639197
            Cantharellus_chicagoensis_KP639198
            Cantharellus_chicagoensis_KP639199
            Cantharellus_chicagoensis_KP639200
            Cantharellus_chicagoensis_KP639201
            Cantharellus_cibarius_AY041175_
            Cantharellus_cibarius_AY041176_
            Cantharellus_cibarius_JX030469
            Cantharellus_cibarius_KP639203
            Cantharellus_cinnabarinus_JN944016_
            Cantharellus_flavus_JX030436
            Cantharellus_flavus_JX030457_
            Cantharellus_flavus_JX030467
            Cantharellus_formosus_AF044695
            Cantharellus_formosus_AY041184
            Cantharellus_guyanensis_JQ915096
            Cantharellus_guyanensis_JQ915099_
            Cantharellus_lewisii_JN944021_
            Cantharellus_phasmatis_JX030460
            Cantharellus_phasmatis_JX030462
            Cantharellus_phasmatis_JX030465
            Cantharellus_roseocanus_AY041173
            Cantharellus_roseocanus_AY041174
            Cantharellus_roseocanus_AYO41172
            Cantharellus_roseocanus_KP639205
            Cantharellus_sp_KP639202
            Cantharellus_sp_KP639206
            Cantharellus_subalbidus_AY041179
            Cantharellus_subalbidus_AYO41178_
            Cantharellus_tabernensis_JN944013_
            Cantharellus_tenuithrix_JN944017
            ;
END;

BEGIN TREES;
      TITLE Leacock_Cantharellus_ITS;
      LINK TAXA = Taxa;
      TREE ITS = [&R] ((Cantharellus_guyanensis_JQ915099_:1.30927931855375E-6,Cantharellus_guyanensis_JQ915096:1.30927931855375E-6)100:0.11666809037060696,((Cantharellus_tabernensis_JN944013_:0.03677892174232964,(Cantharellus_appalachiensis_HQ416695_:1.30927931855375E-6,Cantharellus_appalachiensis_HQ416694_:1.30927931855375E-6)100:0.007019706409791083)100:0.11243460250201001,(Cantharellus_cinnabarinus_JN944016_:0.10096375497458335,((Cantharellus_formosus_AY041184:0.0026979701202365274,Cantharellus_formosus_AF044695:0.00810194696814547)98:1.30927931855375E-6,(((Cantharellus_chicagoensis_KP639201:1.30927931855375E-6,Cantharellus_chicagoensis_KP639198:1.30927931855375E-6)63:1.30927931855375E-6,(Cantharellus_chicagoensis_KP639197:1.30927931855375E-6,(Cantharellus_chicagoensis_KP639199:0.006380390195564555,Cantharellus_chicagoensis_KP639200:1.30927931855375E-6)86:1.30927931855375E-6)62:0.00286429639911564)100:0.02392765252973118,((Cantharellus_altipes_JN944018_:0.03574621234399736,(Cantharellus_lewisii_JN944021_:0.04928715921149293,Cantharellus_amethysteus_JN944020__:0.021562662156699924)65:0.013021310176253919)18:0.007139077974745032,(Cantharellus_californicus_DQ974688_:0.021903166088652365,(Cantharellus_appalachiensis_HQ386220_:0.03142277820622722,(((Cantharellus_cascadensis_AY041180:1.30927931855375E-6,Cantharellus_cascadensis_AY041181:1.30927931855375E-6)88:0.005751434362569699,(Cantharellus_subalbidus_AY041179:1.30927931855375E-6,Cantharellus_subalbidus_AYO41178_:1.30927931855375E-6)58:1.30927931855375E-6)48:0.0028599733226522153,(Cantharellus_sp_KP639202:1.30927931855375E-6,(Cantharellus_aff_roseocanus_KP639204:1.30927931855375E-6,(Cantharellus_roseocanus_AY041173:1.30927931855375E-6,(Cantharellus_roseocanus_AY041174:1.30927931855375E-6,(Cantharellus_roseocanus_AYO41172:1.30927931855375E-6,(Cantharellus_roseocanus_KP639205:1.30927931855375E-6,((Cantharellus_cibarius_JX030469:1.30927931855375E-6,(Cantharellus_cibarius_AY041175_:1.30927931855375E-6,Cantharellus_cibarius_AY041176_:1.30927931855375E-6)65:0.0028691749394308993)28:1.30927931855375E-6,((Cantharellus_phasmatis_JX030462:1.30927931855375E-6,(Cantharellus_phasmatis_JX030465:1.30927931855375E-6,Cantharellus_phasmatis_JX030460:1.30927931855375E-6)30:1.30927931855375E-6)90:0.005753403818941943,((Cantharellus_sp_KP639206:1.30927931855375E-6,Cantharellus_tenuithrix_JN944017:0.027131488140380012)30:0.002874118988519669,(Cantharellus_cibarius_KP639203:1.30927931855375E-6,(Cantharellus_flavus_JX030436:1.30927931855375E-6,(Cantharellus_flavus_JX030457_:1.30927931855375E-6,Cantharellus_flavus_JX030467:1.30927931855375E-6)59:1.30927931855375E-6)48:1.30927931855375E-6)84:0.002999824735785659)11:1.30927931855375E-6)30:0.0060333042322000515)13:0.0029975584258165925)21:1.30927931855375E-6)6:1.30927931855375E-6)4:1.30927931855375E-6)46:0.003001179277019883)5:1.30927931855375E-6)11:1.30927931855375E-6)29:1.30927931855375E-6)88:0.026337402002175773)17:0.0038169282668251312)28:0.009963500657234338)48:0.02049948226729298)76:0.054665668024218704)69:0.03867870989759916)100:0.11666809037060696);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr91363]


END;