#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 19, 2024; 6:55 GMT

TreeBASE (cc) 1994-2008

Study reference:
Visagie C. 2016. Fifteen new species of Penicillium. Persoonia, 36: 247–280.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S18638]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=41;
        TAXLABELS
            Penicillium_antarticum_CBS100492T_Canescentia_ITS_KJ834503_xx
            Penicillium_antarticum_CBS116938_Canescentia_ITS_KP016845_xx
            Penicillium_antarticum_CBS116939_Canescentia_ITS_KP016829_xx
            Penicillium_atrovenetum_CBS241.56T_Canescentia_ITS_AF033492_xx
            Penicillium_atrovenetum_CBS243.56_Canescentia_ITS_KP016835_xx
            'Penicillium brevicompactum CBS257.29T_Brevicompacta_ITS_AY484912'
            Penicillium_canescens_CBS300.48T_Canescentia_ITS_AF033493_xx
            Penicillium_canescens_IMI149218_Canescentia_ITS_KP016841_xx
            Penicillium_cf_canescens_KAS3618_Canescentia_ITS_na_xx
            Penicillium_cf_canescens_KAS3622_Canescentia_ITS_na_xx
            Penicillium_cf_corraligerum_KAS2101_Canescentia_ITS_na_xx
            Penicillium_cf_corraligerum_KAS2203_Canescentia_ITS_na_xx
            Penicillium_cf_murciacum_CBS414.68_Canescentia_ITS_KP016842_xx
            Penicillium_cf_murciacum_IBT31963_Canescentia_ITS_JX140834_xx
            Penicillium_coralligerum_CBS114.69_Canescentia_ITS_KP016836_xx
            Penicillium_coralligerum_CBS123.65T_Canescentia_ITS_JN617667_xx
            Penicillium_dunedinense_CBS138218T_Canescentia_ITS_KJ775678_xx
            Penicillium_echinatum_NRRL917T_Canescentia_ITS_KP016840_xx
            Penicillium_granatense_CBS166.81T_Canescentia_ITS_KC411682_xx
            Penicillium_griseoazureum_CBS162.42T_Canescentia_ITS_KC411679_xx
            Penicillium_janczewskii_CBS221.28T_Canescentia_ITS_AY157487_xx
            Penicillium_janczewskii_CBS279.47_Canescentia_ITS_KP016837_xx
            Penicillium_janczewskii_CBS413.68_Canescentia_ITS_KP016838_xx
            Penicillium_jensenii_CBS216.28_Canescentia_ITS_JN617693_xx
            Penicillium_jensenii_CBS327.59T_Canescentia_ITS_AY443470_xx
            Penicillium_murciacum_CBS161.81T_Canescentia_ITS_KP016844_xx
            Penicillium_murciacum_CBS458.69_Canescentia_ITS_KP016843_xx
            Penicillium_nigricans_CBS354.48T_Canescentia_ITS_KC411755_xx
            Penicillium_nigricans_var_sulphuratum_CBS744.70T_Canescentia_ITS_KP016839_xx
            Penicillium_novaezeelandiae_CBS137.41T_Canescentia_ITS_JN617688_xx
            Penicillium_novaezeelandiae_CBS546.77_Canescentia_ITS_KP016846_xx
            Penicillium_novaezeelandiae_clade1_CBS138942T_Canescentia_ITS_JX140854_xx
            Penicillium_novaezeelandiae_clade1_CBS138955_Canescentia_ITS_JX140850_xx
            Penicillium_novaezeelandiae_clade1_CBS138956_Canescentia_ITS_JX140851_xx
            Penicillium_novaezeelandiae_clade2_CBS138936_Canescentia_ITS_JX140853_xx
            Penicillium_novaezeelandiae_clade2_CBS138938_Canescentia_ITS_JX140846_xx
            Penicillium_novaezeelandiae_clade2_CBS138949T_Canescentia_ITS_JX140835_xx
            Penicillium_radiatolobatum_CBS340.79T_Canescentia_ITS_KC411745_xx
            Penicillium_radiatolobatum_IBT31958_Canescentia_ITS_JX140832_xx
            Penicillium_radiatolobatum_IBT31959_Canescentia_ITS_JX140833_xx
            Penicillium_yarmokense_CBS410.69T_Canescentia_ITS_KC411757_xx
            ;
END;

BEGIN TREES;
      TITLE 'Canescentia_MP_ITS';
      LINK TAXA = Taxa;
      TREE Canescentia_MP_ITS_PAUP_5 = [&R] (Penicillium_antarticum_CBS100492T_Canescentia_ITS_KJ834503_xx:0.0,(Penicillium_antarticum_CBS116939_Canescentia_ITS_KP016829_xx:0.0,Penicillium_antarticum_CBS116938_Canescentia_ITS_KP016845_xx:0.0,(Penicillium_coralligerum_CBS123.65T_Canescentia_ITS_JN617667_xx:0.0,Penicillium_coralligerum_CBS114.69_Canescentia_ITS_KP016836_xx:0.0):1.0,(Penicillium_atrovenetum_CBS243.56_Canescentia_ITS_KP016835_xx:0.0,Penicillium_atrovenetum_CBS241.56T_Canescentia_ITS_AF033492_xx:0.0):2.0,((((((Penicillium_canescens_CBS300.48T_Canescentia_ITS_AF033493_xx:0.0,Penicillium_granatense_CBS166.81T_Canescentia_ITS_KC411682_xx:0.0,Penicillium_radiatolobatum_CBS340.79T_Canescentia_ITS_KC411745_xx:0.0,Penicillium_yarmokense_CBS410.69T_Canescentia_ITS_KC411757_xx:0.0,Penicillium_jensenii_CBS216.28_Canescentia_ITS_JN617693_xx:0.0,Penicillium_radiatolobatum_IBT31959_Canescentia_ITS_JX140833_xx:0.0,Penicillium_canescens_IMI149218_Canescentia_ITS_KP016841_xx:0.0,Penicillium_dunedinense_CBS138218T_Canescentia_ITS_KJ775678_xx:0.0,Penicillium_echinatum_NRRL917T_Canescentia_ITS_KP016840_xx:0.0,Penicillium_janczewskii_CBS221.28T_Canescentia_ITS_AY157487_xx:0.0,Penicillium_janczewskii_CBS413.68_Canescentia_ITS_KP016838_xx:0.0,Penicillium_nigricans_CBS354.48T_Canescentia_ITS_KC411755_xx:0.0,Penicillium_griseoazureum_CBS162.42T_Canescentia_ITS_KC411679_xx:0.0,Penicillium_murciacum_CBS161.81T_Canescentia_ITS_KP016844_xx:0.0,Penicillium_radiatolobatum_IBT31958_Canescentia_ITS_JX140832_xx:0.0,Penicillium_nigricans_var_sulphuratum_CBS744.70T_Canescentia_ITS_KP016839_xx:0.0,Penicillium_janczewskii_CBS279.47_Canescentia_ITS_KP016837_xx:0.0,Penicillium_murciacum_CBS458.69_Canescentia_ITS_KP016843_xx:0.0,Penicillium_jensenii_CBS327.59T_Canescentia_ITS_AY443470_xx:0.0):1.0,Penicillium_cf_murciacum_IBT31963_Canescentia_ITS_JX140834_xx:0.0,Penicillium_cf_murciacum_CBS414.68_Canescentia_ITS_KP016842_xx:0.0,(Penicillium_cf_canescens_KAS3618_Canescentia_ITS_na_xx:0.0,Penicillium_cf_canescens_KAS3622_Canescentia_ITS_na_xx:0.0):1.0):2.0,'Penicillium brevicompactum CBS257.29T_Brevicompacta_ITS_AY484912':34.0):1.0,Penicillium_cf_corraligerum_KAS2101_Canescentia_ITS_na_xx:0.0):1.0,Penicillium_cf_corraligerum_KAS2203_Canescentia_ITS_na_xx:0.0):2.0,(Penicillium_novaezeelandiae_CBS137.41T_Canescentia_ITS_JN617688_xx:0.0,Penicillium_novaezeelandiae_CBS546.77_Canescentia_ITS_KP016846_xx:0.0,Penicillium_novaezeelandiae_clade1_CBS138942T_Canescentia_ITS_JX140854_xx:0.0,Penicillium_novaezeelandiae_clade2_CBS138936_Canescentia_ITS_JX140853_xx:0.0,Penicillium_novaezeelandiae_clade2_CBS138938_Canescentia_ITS_JX140846_xx:0.0,Penicillium_novaezeelandiae_clade1_CBS138956_Canescentia_ITS_JX140851_xx:0.0,Penicillium_novaezeelandiae_clade1_CBS138955_Canescentia_ITS_JX140850_xx:0.0,Penicillium_novaezeelandiae_clade2_CBS138949T_Canescentia_ITS_JX140835_xx:0.0):1.0):2.0):0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr92466]


END;