#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 19, 2024; 7:46 GMT TreeBASE (cc) 1994-2008 Study reference: Visagie C. 2016. Fifteen new species of Penicillium. Persoonia, 36: 247–280. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S18638] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=89; TAXLABELS Penicillium_abidjanum_CBS246.67T_LanataDivaricata_ITS_GU981582_xxx Penicillium_annulatum_CBS135123_LanataDivaricata_ITS_JX091423_xxx Penicillium_annulatum_CBS135124_LanataDivaricata_ITS_JX091424_xxx Penicillium_annulatum_CBS135126T_LanataDivaricata_ITS_JX091426_xxx Penicillium_araracuaraense_CBS113149T_LanataDivaricata_ITS_GU981597_xxx Penicillium_brachycaulon_CBS135127T_LanataDivaricata_ITS_FJ231021_xxx Penicillium_brasilianum_CBS253.55T_LanataDivaricata_ITS_GU981577_xxx Penicillium_brefeldianum_CBS235.81T_LanataDivaricata_ITS_AF033435_xxx Penicillium_caperatum_CBS443.75T_LanataDivaricata_ITS_KC411761_xxx Penicillium_cf_araracuaraense_KAS1946_LanataDivaricata_ITS_na_xxx Penicillium_cf_araracuaraense_KAS1947_LanataDivaricata_ITS_na_xxx Penicillium_cf_araracuaraense_KAS2256_LanataDivaricata_ITS_na_xxx Penicillium_cf_mariaecrucis2_KAS2145_LanataDivaricata_ITS_na_xxx Penicillium_cf_mariaecrucis2_KAS2270_LanataDivaricata_ITS_na_xxx Penicillium_cf_mariaecrucis2_KAS2271_LanataDivaricata_ITS_na_xxx Penicillium_cf_mariaecrucis3_KAS2168T_LanataDivaricata_ITS_na_xxx Penicillium_cf_mariaecrucis3_KAS2181_LanataDivaricata_ITS_na_xxx Penicillium_cf_singorense2_KAS1392_LanataDivaricata_ITS_na_xxx Penicillium_cf_singorense2_KAS1396_LanataDivaricata_ITS_na_xxx Penicillium_cf_singorense2_KAS2555_LanataDivaricata_ITS_na_xxx Penicillium_cf_subrubescens_KAS2166_LanataDivaricata_ITS_na_xxx Penicillium_cf_subrubescens_KAS2169_LanataDivaricata_ITS_na_xxx Penicillium_cf_subrubescens_KAS2170_LanataDivaricata_ITS_na_xxx Penicillium_cf_subrubescens_KAS2172_LanataDivaricata_ITS_na_xxx Penicillium_cf_subrubescens_KAS2176_LanataDivaricata_ITS_na_xxx Penicillium_cf_subrubescens_KAS2177_LanataDivaricata_ITS_na_xxx Penicillium_cf_subrubescens_KAS2182_LanataDivaricata_ITS_na_xxx Penicillium_cf_subrubescens_KAS2193_LanataDivaricata_ITS_na_xxx Penicillium_cf_subrubescens_KAS2199_LanataDivaricata_ITS_na_xxx Penicillium_cf_vasconiae_KAS1949_DAOM167033_LanataDivaricata_ITS_na_xxx Penicillium_cf_vasconiae_KAS1951_DAOM167011_LanataDivaricata_ITS_na_xxx Penicillium_cf_wotroi_KAS2208_LanataDivaricata_ITS_na_xxx Penicillium_cf_wotroi_KAS2209_LanataDivaricata_ITS_na_xxx Penicillium_cluniae_CBS326.89T_LanataDivaricata_ITS_KF296406_xxx Penicillium_coeruleum_CBS141.45T_LanataDivaricata_ITS_GU981606_xxx Penicillium_cremeogriseum_CBS223.66T_LanataDivaricata_ITS_GU981586_xxx Penicillium_daleae_CBS211.28T_LanataDivaricata_ITS_GU981583_xxx Penicillium_ehrlichii_CBS324.48T_LanataDivaricata_ITS_AF033432_xxx Penicillium_elleniae_CBS118135T_LanataDivaricata_ITS_GU981612_xxx Penicillium_glabrum_CBS125543T_Aspergilloides_ITS_KM189530_xxx Penicillium_glaucoroseum_NRRL908T_LanataDivaricata_ITS_KF296407_xxx Penicillium_griseopurpureum_CBS406.65T_LanataDivaricata_ITS_KF296408_xxx Penicillium_janthinellum_CBS340.48T_LanataDivaricata_ITS_GU981585_xxx Penicillium_javanicum_CBS341.48T_LanataDivaricata_ITS_GU981613_xxx Penicillium_javanicum_oligosporum_CBS349.51T_LanataDivaricata_ITS_KC411752_xxx Penicillium_koreense_KACC47721T_LanataDivaricata_ITS_KJ801939_xxx Penicillium_levitum_CBS345.48T_LanataDivaricata_ITS_GU981607_xxx Penicillium_limosum_CBS339.97T_LanataDivaricata_ITS_GU981568_xxx Penicillium_lineolatum_CBS188.77T_LanataDivaricata_ITS_GU981579_xxx Penicillium_ludwigii_CBS417.68T_LanataDivaricata_ITS_KF296409_xxx Penicillium_malacosphaerulum_CBS135120T_LanataDivaricata_ITS_FJ231026_xxx Penicillium_malacosphaerulum_CBS135121_LanataDivaricata_ITS_FJ231024_xxx Penicillium_mariaecrucis_CBS271.83T_LanataDivaricata_ITS_GU981593_xxx Penicillium_meloforme_CBS445.74T_LanataDivaricata_ITS_KC411762_xxx Penicillium_ochrochloron_CBS357.48T_LanataDivaricata_ITS_GU981604_xxx Penicillium_ochrochloron_cuprophilum_CBS133150T_LanataDivaricata_ITS_KC346347_xxx Penicillium_onobense_CBS174.81T_LanataDivaricata_ITS_GU981575_xxx Penicillium_ortum_CBS135669T_LanataDivaricata_ITS_JX091427_xxx Penicillium_ortum_CBS135670_LanataDivaricata_ITS_JX091428_xxx 'Penicillium oxalicum CBS219.30T_LanataDivaricata_ITS_AF033438' Penicillium_paraherquei_CBS338.59T_LanataDivaricata_ITS_AF178511_xxx Penicillium_penarojense_CBS113178T_LanataDivaricata_ITS_GU981570_xxx Penicillium_piscarium_CBS362.48T_LanataDivaricata_ITS_GU981600_xxx Penicillium_pulvillorum_CBS280.39T_LanataDivaricata_ITS_AF178517_xxx Penicillium_pulvillorum_ciegleri_CBS275.83T_LanataDivaricata_ITS_AF178513_xxx Penicillium_raperi_CBS281.58T_LanataDivaricata_ITS_AF033433_xxx Penicillium_reticulisporum_CBS122.68T_LanataDivaricata_ITS_AF033437_xxx Penicillium_reticulisporum_arvense_CBS513.74T_LanataDivaricata_ITS_GU981618_xxx Penicillium_rolfsii_CBS368.48T_LanataDivaricata_ITS_JN617705_xxx Penicillium_simplicissimum_CBS372.48T_LanataDivaricata_ITS_GU981588_xxx Penicillium_singorense_CBS138214T_LanataDivaricata_ITS_KJ775674_xxx Penicillium_skrjabinii_CBS439.75T_LanataDivaricata_ITS_GU981576_xxx Penicillium_skrjabinii_DTO180I3_LanataDivaricata_ITS_JX091432_xxx Penicillium_skrjabinii_NRRL13055_LanataDivaricata_ITS_EU427287_xxx Penicillium_subrubescens_CBS129543_LanataDivaricata_ITS_KC797635_xxx Penicillium_subrubescens_CBS129617_LanataDivaricata_ITS_KC797636_xxx Penicillium_subrubescens_CBS130052_LanataDivaricata_ITS_KC797637_xxx Penicillium_subrubescens_CBS130205_LanataDivaricata_ITS_KC797638_xxx Penicillium_subrubescens_CBS131061_LanataDivaricata_ITS_KC797639_xxx Penicillium_subrubescens_CBS131064_LanataDivaricata_ITS_KC797640_xxx Penicillium_subrubescens_CBS132785T_LanataDivaricata_ITS_KC346350_xxx Penicillium_subrubescens_CBS134204_LanataDivaricata_ITS_KC797642_xxx Penicillium_subrubescens_CBS134205_LanataDivaricata_ITS_KC797643_xxx Penicillium_svalbardense_CBS122416T_LanataDivaricata_ITS_GU981603_xxx Penicillium_svalbardense_DTO117I6_LanataDivaricata_ITS_KC346348_xxx Penicillium_vanderhammenii_CBS126216T_LanataDivaricata_ITS_GU981574_xxx Penicillium_vasconiae_CBS339.79T_LanataDivaricata_ITS_GU981599_xxx Penicillium_wotroi_CBS118171T_LanataDivaricata_ITS_GU981591_xxx Penicillium_zonatum_CBS992.72T_LanataDivaricata_ITS_GU981581_xxx ; END; BEGIN TREES; TITLE 'LanataDivaricata_MP_ITS'; LINK TAXA = Taxa; TREE LanataDivaricata_MP_ITS_PAUP_25 = [&R] ('Penicillium oxalicum CBS219.30T_LanataDivaricata_ITS_AF033438':0.0,((((Penicillium_abidjanum_CBS246.67T_LanataDivaricata_ITS_GU981582_xxx:0.0,Penicillium_daleae_CBS211.28T_LanataDivaricata_ITS_GU981583_xxx:1.0):2.0,((((((((((((Penicillium_cf_araracuaraense_KAS1946_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_araracuaraense_KAS1947_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_araracuaraense_KAS2256_LanataDivaricata_ITS_na_xxx:0.0):3.0,((Penicillium_vasconiae_CBS339.79T_LanataDivaricata_ITS_GU981599_xxx:3.0,((((((Penicillium_cf_subrubescens_KAS2166_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2169_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2170_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2172_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2177_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2182_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2199_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2176_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2193_LanataDivaricata_ITS_na_xxx:0.0):2.0,(((Penicillium_subrubescens_CBS129543_LanataDivaricata_ITS_KC797635_xxx:0.0,Penicillium_subrubescens_CBS129617_LanataDivaricata_ITS_KC797636_xxx:0.0,Penicillium_subrubescens_CBS130052_LanataDivaricata_ITS_KC797637_xxx:0.0,Penicillium_subrubescens_CBS131061_LanataDivaricata_ITS_KC797639_xxx:0.0,Penicillium_subrubescens_CBS134204_LanataDivaricata_ITS_KC797642_xxx:0.0,Penicillium_subrubescens_CBS134205_LanataDivaricata_ITS_KC797643_xxx:0.0,Penicillium_subrubescens_CBS132785T_LanataDivaricata_ITS_KC346350_xxx:1.0):2.0,Penicillium_subrubescens_CBS130205_LanataDivaricata_ITS_KC797638_xxx:0.0,Penicillium_subrubescens_CBS131064_LanataDivaricata_ITS_KC797640_xxx:0.0):3.0,Penicillium_piscarium_CBS362.48T_LanataDivaricata_ITS_GU981600_xxx:1.0):1.0):2.0,(Penicillium_svalbardense_CBS122416T_LanataDivaricata_ITS_GU981603_xxx:0.0,Penicillium_svalbardense_DTO117I6_LanataDivaricata_ITS_KC346348_xxx:0.0):0.0):1.0,(Penicillium_ochrochloron_CBS357.48T_LanataDivaricata_ITS_GU981604_xxx:0.0,Penicillium_ochrochloron_cuprophilum_CBS133150T_LanataDivaricata_ITS_KC346347_xxx:0.0):1.0):2.0,Penicillium_pulvillorum_ciegleri_CBS275.83T_LanataDivaricata_ITS_AF178513_xxx:2.0):0.0,Penicillium_pulvillorum_CBS280.39T_LanataDivaricata_ITS_AF178517_xxx:5.0):2.0):1.0,((((((Penicillium_araracuaraense_CBS113149T_LanataDivaricata_ITS_GU981597_xxx:1.0,Penicillium_mariaecrucis_CBS271.83T_LanataDivaricata_ITS_GU981593_xxx:1.0):1.0,((Penicillium_wotroi_CBS118171T_LanataDivaricata_ITS_GU981591_xxx:2.0,((Penicillium_annulatum_CBS135123_LanataDivaricata_ITS_JX091423_xxx:0.0,Penicillium_annulatum_CBS135126T_LanataDivaricata_ITS_JX091426_xxx:0.0,Penicillium_annulatum_CBS135124_LanataDivaricata_ITS_JX091424_xxx:1.0):1.0,Penicillium_rolfsii_CBS368.48T_LanataDivaricata_ITS_JN617705_xxx:5.0):4.0):1.0,(Penicillium_cf_mariaecrucis3_KAS2168T_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_mariaecrucis3_KAS2181_LanataDivaricata_ITS_na_xxx:0.0):1.0):1.0):1.0,Penicillium_simplicissimum_CBS372.48T_LanataDivaricata_ITS_GU981588_xxx:1.0):1.0,(Penicillium_cf_mariaecrucis2_KAS2145_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_mariaecrucis2_KAS2270_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_mariaecrucis2_KAS2271_LanataDivaricata_ITS_na_xxx:0.0):3.0):1.0,(Penicillium_cf_wotroi_KAS2208_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_wotroi_KAS2209_LanataDivaricata_ITS_na_xxx:0.0,((Penicillium_brasilianum_CBS253.55T_LanataDivaricata_ITS_GU981577_xxx:2.0,(Penicillium_onobense_CBS174.81T_LanataDivaricata_ITS_GU981575_xxx:2.0,Penicillium_paraherquei_CBS338.59T_LanataDivaricata_ITS_AF178511_xxx:4.0):1.0):2.0,(Penicillium_skrjabinii_DTO180I3_LanataDivaricata_ITS_JX091432_xxx:1.0,Penicillium_skrjabinii_NRRL13055_LanataDivaricata_ITS_EU427287_xxx:0.0,Penicillium_skrjabinii_CBS439.75T_LanataDivaricata_ITS_GU981576_xxx:1.0):1.0):7.0):1.0):2.0,((Penicillium_cf_vasconiae_KAS1949_DAOM167033_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_glabrum_CBS125543T_Aspergilloides_ITS_KM189530_xxx:28.0):0.0,Penicillium_cf_vasconiae_KAS1951_DAOM167011_LanataDivaricata_ITS_na_xxx:0.0):2.0):3.0):2.0):1.0,Penicillium_elleniae_CBS118135T_LanataDivaricata_ITS_GU981612_xxx:2.0):2.0,Penicillium_caperatum_CBS443.75T_LanataDivaricata_ITS_KC411761_xxx:2.0):0.0,Penicillium_malacosphaerulum_CBS135120T_LanataDivaricata_ITS_FJ231026_xxx:0.0):0.0,Penicillium_malacosphaerulum_CBS135121_LanataDivaricata_ITS_FJ231024_xxx:0.0):0.0,(Penicillium_reticulisporum_CBS122.68T_LanataDivaricata_ITS_AF033437_xxx:0.0,Penicillium_reticulisporum_arvense_CBS513.74T_LanataDivaricata_ITS_GU981618_xxx:0.0):1.0):1.0,(Penicillium_javanicum_CBS341.48T_LanataDivaricata_ITS_GU981613_xxx:0.0,Penicillium_javanicum_oligosporum_CBS349.51T_LanataDivaricata_ITS_KC411752_xxx:0.0):3.0):1.0,(Penicillium_coeruleum_CBS141.45T_LanataDivaricata_ITS_GU981606_xxx:0.0,Penicillium_levitum_CBS345.48T_LanataDivaricata_ITS_GU981607_xxx:0.0):2.0):0.0,((Penicillium_raperi_CBS281.58T_LanataDivaricata_ITS_AF033433_xxx:2.0,(((Penicillium_cluniae_CBS326.89T_LanataDivaricata_ITS_KF296406_xxx:0.0,Penicillium_janthinellum_CBS340.48T_LanataDivaricata_ITS_GU981585_xxx:0.0):1.0,Penicillium_cremeogriseum_CBS223.66T_LanataDivaricata_ITS_GU981586_xxx:0.0,Penicillium_ortum_CBS135669T_LanataDivaricata_ITS_JX091427_xxx:0.0,Penicillium_ortum_CBS135670_LanataDivaricata_ITS_JX091428_xxx:0.0,Penicillium_koreense_KACC47721T_LanataDivaricata_ITS_KJ801939_xxx:1.0,Penicillium_glaucoroseum_NRRL908T_LanataDivaricata_ITS_KF296407_xxx:1.0):0.0,(Penicillium_ludwigii_CBS417.68T_LanataDivaricata_ITS_KF296409_xxx:0.0,Penicillium_brachycaulon_CBS135127T_LanataDivaricata_ITS_FJ231021_xxx:5.0):1.0):2.0):7.0,Penicillium_meloforme_CBS445.74T_LanataDivaricata_ITS_KC411762_xxx:0.0):2.0):2.0,Penicillium_zonatum_CBS992.72T_LanataDivaricata_ITS_GU981581_xxx:3.0):1.0,((Penicillium_brefeldianum_CBS235.81T_LanataDivaricata_ITS_AF033435_xxx:1.0,Penicillium_limosum_CBS339.97T_LanataDivaricata_ITS_GU981568_xxx:2.0):5.0,(Penicillium_ehrlichii_CBS324.48T_LanataDivaricata_ITS_AF033432_xxx:5.0,Penicillium_lineolatum_CBS188.77T_LanataDivaricata_ITS_GU981579_xxx:1.0):2.0):3.0):2.0):1.0,Penicillium_griseopurpureum_CBS406.65T_LanataDivaricata_ITS_KF296408_xxx:3.0):3.0,(((Penicillium_cf_singorense2_KAS1392_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_singorense2_KAS1396_LanataDivaricata_ITS_na_xxx:0.0,Penicillium_cf_singorense2_KAS2555_LanataDivaricata_ITS_na_xxx:0.0):1.0,Penicillium_singorense_CBS138214T_LanataDivaricata_ITS_KJ775674_xxx:3.0):1.0,(Penicillium_penarojense_CBS113178T_LanataDivaricata_ITS_GU981570_xxx:2.0,Penicillium_vanderhammenii_CBS126216T_LanataDivaricata_ITS_GU981574_xxx:4.0):5.0):6.0):18.0); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr92539] END;