#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 19, 2024; 7:35 GMT TreeBASE (cc) 1994-2008 Study reference: Visagie C. 2016. Fifteen new species of Penicillium. Persoonia, 36: 247–280. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S18638] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=88; TAXLABELS Penicillium_abidjanum_CBS246.67T_LanataDivaricata_CaM_KF296383_xxx Penicillium_annulatum_CBS135123_LanataDivaricata_CaM_JX141547_xxx Penicillium_annulatum_CBS135124_LanataDivaricata_CaM_JX141548_xxx Penicillium_annulatum_CBS135126T_LanataDivaricata_CaM_JX141545_xxx Penicillium_araracuaraense_CBS113149T_LanataDivaricata_CaM_KF296373_xxx Penicillium_brachycaulon_CBS135127T_LanataDivaricata_CaM_JX141536_xxx Penicillium_brasilianum_CBS253.55T_LanataDivaricata_CaM_AB667857_xxx Penicillium_brefeldianum_CBS235.81T_LanataDivaricata_CaM_EU021683_xxx Penicillium_caperatum_CBS443.75T_LanataDivaricata_CaM_KF296392_xxx Penicillium_cf_araracuaraense_KAS1946_LanataDivaricata_CaM_na_xxx Penicillium_cf_araracuaraense_KAS1947_LanataDivaricata_CaM_na_xxx Penicillium_cf_araracuaraense_KAS2256_LanataDivaricata_CaM_na_xxx Penicillium_cf_mariaecrucis2_KAS2145_LanataDivaricata_CaM_na_xxx Penicillium_cf_mariaecrucis2_KAS2270_LanataDivaricata_CaM_na_xxx Penicillium_cf_mariaecrucis2_KAS2271_LanataDivaricata_CaM_na_xxx Penicillium_cf_mariaecrucis3_KAS2168T_LanataDivaricata_CaM_na_xxx Penicillium_cf_mariaecrucis3_KAS2181_LanataDivaricata_CaM_na_xxx Penicillium_cf_singorense2_KAS1392_LanataDivaricata_CaM_na_xxx Penicillium_cf_singorense2_KAS1396_LanataDivaricata_CaM_na_xxx Penicillium_cf_singorense2_KAS2555_LanataDivaricata_CaM_na_xxx Penicillium_cf_subrubescens_KAS2166_LanataDivaricata_CaM_na_xxx Penicillium_cf_subrubescens_KAS2169_LanataDivaricata_CaM_na_xxx Penicillium_cf_subrubescens_KAS2170_LanataDivaricata_CaM_na_xxx Penicillium_cf_subrubescens_KAS2172_LanataDivaricata_CaM_na_xxx Penicillium_cf_subrubescens_KAS2176_LanataDivaricata_CaM_na_xxx Penicillium_cf_subrubescens_KAS2177_LanataDivaricata_CaM_na_xxx Penicillium_cf_subrubescens_KAS2182_LanataDivaricata_CaM_na_xxx Penicillium_cf_subrubescens_KAS2193_LanataDivaricata_CaM_na_xxx Penicillium_cf_subrubescens_KAS2199_LanataDivaricata_CaM_na_xxx Penicillium_cf_vasconiae_KAS1949_DAOM167033_LanataDivaricata_CaM_na_xxx Penicillium_cf_vasconiae_KAS1951_DAOM167011_LanataDivaricata_CaM_na_xxx Penicillium_cf_wotroi_KAS2208_LanataDivaricata_CaM_na_xxx Penicillium_cf_wotroi_KAS2209_LanataDivaricata_CaM_na_xxx Penicillium_cluniae_CBS326.89T_LanataDivaricata_CaM_KF296402_xxx Penicillium_coeruleum_CBS141.45T_LanataDivaricata_CaM_KF296393_xxx Penicillium_cremeogriseum_CBS223.66T_LanataDivaricata_CaM_KF296403_xxx Penicillium_daleae_CBS211.28T_LanataDivaricata_CaM_KF296385_xxx Penicillium_ehrlichii_CBS324.48T_LanataDivaricata_CaM_KF296395_xxx Penicillium_elleniae_CBS118135T_LanataDivaricata_CaM_KF296389_xxx Penicillium_glabrum_CBS125543T_Aspergilloides_CaM_KM089152_xxx Penicillium_glaucoroseum_NRRL908T_LanataDivaricata_CaM_KF296400_xxx Penicillium_griseopurpureum_CBS406.65T_LanataDivaricata_CaM_KF296384_xxx Penicillium_janthinellum_CBS340.48T_LanataDivaricata_CaM_KF296401_xxx Penicillium_javanicum_CBS341.48T_LanataDivaricata_CaM_KF296387_xxx Penicillium_javanicum_oligosporum_CBS349.51T_LanataDivaricata_CaM_KF296388_xxx Penicillium_levitum_CBS345.48T_LanataDivaricata_CaM_KF296394_xxx Penicillium_limosum_CBS339.97T_LanataDivaricata_CaM_KF296398_xxx Penicillium_lineolatum_CBS188.77T_LanataDivaricata_CaM_KF296397_xxx Penicillium_ludwigii_CBS417.68T_LanataDivaricata_CaM_KF296404_xxx Penicillium_malacosphaerulum_CBS135120T_LanataDivaricata_CaM_JX141542_xxx Penicillium_malacosphaerulum_CBS135121_LanataDivaricata_CaM_JX141540_xxx Penicillium_mariaecrucis_CBS271.83T_LanataDivaricata_CaM_KF296374_xxx Penicillium_meloforme_CBS445.74T_LanataDivaricata_CaM_KF296396_xxx Penicillium_ochrochloron_CBS357.48T_LanataDivaricata_CaM_KF296378_xxx Penicillium_ochrochloron_cuprophilum_CBS133150T_LanataDivaricata_CaM_KC346341_xxx Penicillium_onobense_CBS174.81T_LanataDivaricata_CaM_KF296371_xxx Penicillium_ortum_CBS135669T_LanataDivaricata_CaM_JX141551_xxx Penicillium_ortum_CBS135670_LanataDivaricata_CaM_JX141552_xxx 'Penicillium oxalicum CBS219.30T_LanataDivaricata_CaM_KF296367' Penicillium_paraherquei_CBS338.59T_LanataDivaricata_CaM_KF296372_xxx Penicillium_penarojense_CBS113178T_LanataDivaricata_CaM_KF296381_xxx Penicillium_piscarium_CBS362.48T_LanataDivaricata_CaM_KF296379_xxx Penicillium_pulvillorum_CBS280.39T_LanataDivaricata_CaM_KF296377_xxx Penicillium_pulvillorum_ciegleri_CBS275.83T_LanataDivaricata_CaM_KF296376_xxx Penicillium_raperi_CBS281.58T_LanataDivaricata_CaM_KF296399_xxx Penicillium_reticulisporum_CBS122.68T_LanataDivaricata_CaM_KF296391_xxx Penicillium_reticulisporum_arvense_CBS513.74T_LanataDivaricata_CaM_KF296390_xxx Penicillium_rolfsii_CBS368.48T_LanataDivaricata_CaM_KF296375_xxx Penicillium_simplicissimum_CBS372.48T_LanataDivaricata_CaM_KF296368_xxx Penicillium_singorense_CBS138214T_LanataDivaricata_CaM_KJ775403_xxx Penicillium_skrjabinii_CBS439.75T_LanataDivaricata_CaM_KF296370_xxx Penicillium_skrjabinii_DTO180I3_LanataDivaricata_CaM_JX141544_xxx Penicillium_skrjabinii_NRRL13055_LanataDivaricata_CaM_EU427280_xxx Penicillium_subrubescens_CBS129543_LanataDivaricata_CaM_KC797590_xxx Penicillium_subrubescens_CBS129617_LanataDivaricata_CaM_KC797591_xxx Penicillium_subrubescens_CBS130052_LanataDivaricata_CaM_KC797592_xxx Penicillium_subrubescens_CBS130205_LanataDivaricata_CaM_KC797593_xxx Penicillium_subrubescens_CBS131061_LanataDivaricata_CaM_KC797594_xxx Penicillium_subrubescens_CBS131064_LanataDivaricata_CaM_KC797595_xxx Penicillium_subrubescens_CBS132785T_LanataDivaricata_CaM_KC346330_xxx Penicillium_subrubescens_CBS134204_LanataDivaricata_CaM_KC797597_xxx Penicillium_subrubescens_CBS134205_LanataDivaricata_CaM_KC797598_xxx Penicillium_svalbardense_CBS122416T_LanataDivaricata_CaM_KC346338_xxx Penicillium_svalbardense_DTO117I6_LanataDivaricata_CaM_KC346335_xxx Penicillium_vanderhammenii_CBS126216T_LanataDivaricata_CaM_KF296382_xxx Penicillium_vasconiae_CBS339.79T_LanataDivaricata_CaM_KF296386_xxx Penicillium_wotroi_CBS118171T_LanataDivaricata_CaM_KF296369_xxx Penicillium_zonatum_CBS992.72T_LanataDivaricata_CaM_KF296380_xxx ; END; BEGIN TREES; TITLE 'LanataDivaricata_MP_CaM'; LINK TAXA = Taxa; TREE LanataDivaricata_MP_CaM_PAUP_13 = [&R] ('Penicillium oxalicum CBS219.30T_LanataDivaricata_CaM_KF296367':0.0,((((((((((Penicillium_abidjanum_CBS246.67T_LanataDivaricata_CaM_KF296383_xxx:18.0,((Penicillium_daleae_CBS211.28T_LanataDivaricata_CaM_KF296385_xxx:13.0,Penicillium_griseopurpureum_CBS406.65T_LanataDivaricata_CaM_KF296384_xxx:26.0):6.0,((Penicillium_penarojense_CBS113178T_LanataDivaricata_CaM_KF296381_xxx:10.0,Penicillium_vanderhammenii_CBS126216T_LanataDivaricata_CaM_KF296382_xxx:23.0):6.0,((Penicillium_cf_singorense2_KAS1392_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_singorense2_KAS2555_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_singorense2_KAS1396_LanataDivaricata_CaM_na_xxx:1.0):6.0,Penicillium_singorense_CBS138214T_LanataDivaricata_CaM_KJ775403_xxx:23.0):10.0):20.0):9.0):6.0,Penicillium_zonatum_CBS992.72T_LanataDivaricata_CaM_KF296380_xxx:26.0):19.0,(((((Penicillium_araracuaraense_CBS113149T_LanataDivaricata_CaM_KF296373_xxx:17.0,Penicillium_wotroi_CBS118171T_LanataDivaricata_CaM_KF296369_xxx:28.0):8.0,(Penicillium_mariaecrucis_CBS271.83T_LanataDivaricata_CaM_KF296374_xxx:11.0,(Penicillium_cf_mariaecrucis2_KAS2145_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_mariaecrucis2_KAS2270_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_mariaecrucis2_KAS2271_LanataDivaricata_CaM_na_xxx:0.0):13.0):3.0):4.0,((Penicillium_brasilianum_CBS253.55T_LanataDivaricata_CaM_AB667857_xxx:14.0,(Penicillium_onobense_CBS174.81T_LanataDivaricata_CaM_KF296371_xxx:8.0,Penicillium_paraherquei_CBS338.59T_LanataDivaricata_CaM_KF296372_xxx:7.0):2.0):7.0,((Penicillium_skrjabinii_CBS439.75T_LanataDivaricata_CaM_KF296370_xxx:0.0,Penicillium_skrjabinii_NRRL13055_LanataDivaricata_CaM_EU427280_xxx:0.0):3.0,Penicillium_skrjabinii_DTO180I3_LanataDivaricata_CaM_JX141544_xxx:3.0):6.0):13.0):4.0,((Penicillium_simplicissimum_CBS372.48T_LanataDivaricata_CaM_KF296368_xxx:19.0,(Penicillium_cf_wotroi_KAS2208_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_wotroi_KAS2209_LanataDivaricata_CaM_na_xxx:0.0):5.0):5.0,(Penicillium_cf_mariaecrucis3_KAS2168T_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_mariaecrucis3_KAS2181_LanataDivaricata_CaM_na_xxx:0.0):21.0):7.0):6.0,(Penicillium_cf_araracuaraense_KAS1946_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_araracuaraense_KAS1947_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_araracuaraense_KAS2256_LanataDivaricata_CaM_na_xxx:0.0):20.0):20.0):7.0,(((((Penicillium_brachycaulon_CBS135127T_LanataDivaricata_CaM_JX141536_xxx:23.0,((Penicillium_brefeldianum_CBS235.81T_LanataDivaricata_CaM_EU021683_xxx:9.0,Penicillium_limosum_CBS339.97T_LanataDivaricata_CaM_KF296398_xxx:11.0):14.0,(((((Penicillium_cluniae_CBS326.89T_LanataDivaricata_CaM_KF296402_xxx:8.0,Penicillium_glaucoroseum_NRRL908T_LanataDivaricata_CaM_KF296400_xxx:11.0,Penicillium_janthinellum_CBS340.48T_LanataDivaricata_CaM_KF296401_xxx:11.0):3.0,Penicillium_ludwigii_CBS417.68T_LanataDivaricata_CaM_KF296404_xxx:4.0):2.0,(Penicillium_ortum_CBS135669T_LanataDivaricata_CaM_JX141551_xxx:1.0,Penicillium_ortum_CBS135670_LanataDivaricata_CaM_JX141552_xxx:4.0):1.0):0.0,Penicillium_cremeogriseum_CBS223.66T_LanataDivaricata_CaM_KF296403_xxx:6.0):13.0,Penicillium_raperi_CBS281.58T_LanataDivaricata_CaM_KF296399_xxx:11.0):9.0):11.0):9.0,Penicillium_lineolatum_CBS188.77T_LanataDivaricata_CaM_KF296397_xxx:22.0):11.0,(((Penicillium_caperatum_CBS443.75T_LanataDivaricata_CaM_KF296392_xxx:12.0,((Penicillium_reticulisporum_CBS122.68T_LanataDivaricata_CaM_KF296391_xxx:0.0,Penicillium_reticulisporum_arvense_CBS513.74T_LanataDivaricata_CaM_KF296390_xxx:0.0):3.0,(Penicillium_malacosphaerulum_CBS135120T_LanataDivaricata_CaM_JX141542_xxx:0.0,Penicillium_malacosphaerulum_CBS135121_LanataDivaricata_CaM_JX141540_xxx:0.0):10.0):1.0):2.0,(Penicillium_javanicum_CBS341.48T_LanataDivaricata_CaM_KF296387_xxx:0.0,Penicillium_javanicum_oligosporum_CBS349.51T_LanataDivaricata_CaM_KF296388_xxx:0.0):22.0):3.0,Penicillium_elleniae_CBS118135T_LanataDivaricata_CaM_KF296389_xxx:13.0):13.0):6.0,((Penicillium_coeruleum_CBS141.45T_LanataDivaricata_CaM_KF296393_xxx:0.0,Penicillium_levitum_CBS345.48T_LanataDivaricata_CaM_KF296394_xxx:0.0):22.0,Penicillium_meloforme_CBS445.74T_LanataDivaricata_CaM_KF296396_xxx:16.0):2.0):5.0,Penicillium_ehrlichii_CBS324.48T_LanataDivaricata_CaM_KF296395_xxx:18.0):23.0):11.0,Penicillium_vasconiae_CBS339.79T_LanataDivaricata_CaM_KF296386_xxx:21.0):11.0,(Penicillium_cf_vasconiae_KAS1949_DAOM167033_LanataDivaricata_CaM_na_xxx:3.0,Penicillium_cf_vasconiae_KAS1951_DAOM167011_LanataDivaricata_CaM_na_xxx:1.0):13.0):13.0,(((Penicillium_annulatum_CBS135123_LanataDivaricata_CaM_JX141547_xxx:0.0,Penicillium_annulatum_CBS135126T_LanataDivaricata_CaM_JX141545_xxx:1.0):2.0,Penicillium_annulatum_CBS135124_LanataDivaricata_CaM_JX141548_xxx:6.0):13.0,Penicillium_piscarium_CBS362.48T_LanataDivaricata_CaM_KF296379_xxx:17.0):3.0):4.0,((Penicillium_pulvillorum_CBS280.39T_LanataDivaricata_CaM_KF296377_xxx:0.0,Penicillium_pulvillorum_ciegleri_CBS275.83T_LanataDivaricata_CaM_KF296376_xxx:0.0):20.0,((((Penicillium_cf_subrubescens_KAS2166_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2169_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2172_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2182_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2176_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2170_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2177_LanataDivaricata_CaM_na_xxx:0.0):1.0,Penicillium_cf_subrubescens_KAS2193_LanataDivaricata_CaM_na_xxx:0.0,Penicillium_cf_subrubescens_KAS2199_LanataDivaricata_CaM_na_xxx:0.0):11.0,((Penicillium_subrubescens_CBS129543_LanataDivaricata_CaM_KC797590_xxx:0.0,Penicillium_subrubescens_CBS134204_LanataDivaricata_CaM_KC797597_xxx:0.0,Penicillium_subrubescens_CBS132785T_LanataDivaricata_CaM_KC346330_xxx:0.0,Penicillium_subrubescens_CBS134205_LanataDivaricata_CaM_KC797598_xxx:1.0,Penicillium_subrubescens_CBS129617_LanataDivaricata_CaM_KC797591_xxx:2.0):2.0,((Penicillium_subrubescens_CBS130052_LanataDivaricata_CaM_KC797592_xxx:0.0,Penicillium_subrubescens_CBS131061_LanataDivaricata_CaM_KC797594_xxx:0.0):2.0,Penicillium_subrubescens_CBS130205_LanataDivaricata_CaM_KC797593_xxx:0.0,Penicillium_subrubescens_CBS131064_LanataDivaricata_CaM_KC797595_xxx:0.0):3.0):14.0):3.0,((Penicillium_svalbardense_DTO117I6_LanataDivaricata_CaM_KC346335_xxx:0.0,Penicillium_svalbardense_CBS122416T_LanataDivaricata_CaM_KC346338_xxx:0.0):11.0,(Penicillium_ochrochloron_cuprophilum_CBS133150T_LanataDivaricata_CaM_KC346341_xxx:0.0,Penicillium_ochrochloron_CBS357.48T_LanataDivaricata_CaM_KF296378_xxx:0.0):16.0):5.0):6.0):5.0):19.0,Penicillium_rolfsii_CBS368.48T_LanataDivaricata_CaM_KF296375_xxx:23.0):62.0,Penicillium_glabrum_CBS125543T_Aspergilloides_CaM_KM089152_xxx:75.0):128.0); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr92591] END;