#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 19, 2024; 7:38 GMT TreeBASE (cc) 1994-2008 Study reference: Visagie C. 2016. Fifteen new species of Penicillium. Persoonia, 36: 247–280. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S18638] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=89; TAXLABELS Penicillium_abidjanum_CBS246.67T_LanataDivaricata_BenA_GU981650_xxx Penicillium_annulatum_CBS135123_LanataDivaricata_BenA_JX091516_xxx Penicillium_annulatum_CBS135124_LanataDivaricata_BenA_JX091517_xxx Penicillium_annulatum_CBS135126T_LanataDivaricata_BenA_JX091514_xxx Penicillium_araracuaraense_CBS113149T_LanataDivaricata_BenA_GU981642_xxx Penicillium_brachycaulon_CBS135127T_LanataDivaricata_BenA_JX091526_xxx Penicillium_brasilianum_CBS253.55T_LanataDivaricata_BenA_GU981629_xxx Penicillium_brefeldianum_CBS235.81T_LanataDivaricata_BenA_GU981623_xxx Penicillium_caperatum_CBS443.75T_LanataDivaricata_BenA_GU981660_xxx Penicillium_cf_araracuaraense_KAS1946_LanataDivaricata_BenA_na_xxx Penicillium_cf_araracuaraense_KAS1947_LanataDivaricata_BenA_na_xxx Penicillium_cf_araracuaraense_KAS2256_LanataDivaricata_BenA_na_xxx Penicillium_cf_mariaecrucis2_KAS2145_LanataDivaricata_BenA_na_xxx Penicillium_cf_mariaecrucis2_KAS2270_LanataDivaricata_BenA_na_xxx Penicillium_cf_mariaecrucis2_KAS2271_LanataDivaricata_BenA_na_xxx Penicillium_cf_mariaecrucis3_KAS2168T_LanataDivaricata_BenA_na_xxx Penicillium_cf_mariaecrucis3_KAS2181_LanataDivaricata_BenA_na_xxx Penicillium_cf_singorense2_KAS1392_LanataDivaricata_BenA_na_xxx Penicillium_cf_singorense2_KAS1396_LanataDivaricata_BenA_na_xxx Penicillium_cf_singorense2_KAS2555_LanataDivaricata_BenA_na_xxx Penicillium_cf_subrubescens_KAS2166_LanataDivaricata_BenA_na_xxx Penicillium_cf_subrubescens_KAS2169_LanataDivaricata_BenA_na_xxx Penicillium_cf_subrubescens_KAS2170_LanataDivaricata_BenA_na_xxx Penicillium_cf_subrubescens_KAS2172_LanataDivaricata_BenA_na_xxx Penicillium_cf_subrubescens_KAS2176_LanataDivaricata_BenA_na_xxx Penicillium_cf_subrubescens_KAS2177_LanataDivaricata_BenA_na_xxx Penicillium_cf_subrubescens_KAS2182_LanataDivaricata_BenA_na_xxx Penicillium_cf_subrubescens_KAS2193_LanataDivaricata_BenA_na_xxx Penicillium_cf_subrubescens_KAS2199_LanataDivaricata_BenA_na_xxx Penicillium_cf_vasconiae_KAS1949_DAOM167033_LanataDivaricata_BenA_na_xxx Penicillium_cf_vasconiae_KAS1951_DAOM167011_LanataDivaricata_BenA_na_xxx Penicillium_cf_wotroi_KAS2208_LanataDivaricata_BenA_na_xxx Penicillium_cf_wotroi_KAS2209_LanataDivaricata_BenA_na_xxx Penicillium_cluniae_CBS326.89T_LanataDivaricata_BenA_KF296471_xxx Penicillium_coeruleum_CBS141.45T_LanataDivaricata_BenA_GU981655_xxx Penicillium_cremeogriseum_CBS223.66T_LanataDivaricata_BenA_GU981624_xxx Penicillium_daleae_CBS211.28T_LanataDivaricata_BenA_GU981649_xxx Penicillium_ehrlichii_CBS324.48T_LanataDivaricata_BenA_KF296464_xxx Penicillium_elleniae_CBS118135T_LanataDivaricata_BenA_GU981663_xxx Penicillium_glabrum_CBS125543T_Aspergilloides_BenA_KM088767_xxx Penicillium_glaucoroseum_NRRL908T_LanataDivaricata_BenA_KF296469_xxx Penicillium_griseopurpureum_CBS406.65T_LanataDivaricata_BenA_KF296467_xxx Penicillium_janthinellum_CBS340.48T_LanataDivaricata_BenA_GU981625_xxx Penicillium_javanicum_CBS341.48T_LanataDivaricata_BenA_GU981657_xxx Penicillium_javanicum_oligosporum_CBS349.51T_LanataDivaricata_BenA_KF296466_xxx Penicillium_koreense_KACC47721T_LanataDivaricata_BenA_KM000846_xxx Penicillium_levitum_CBS345.48T_LanataDivaricata_BenA_GU981654_xxx Penicillium_limosum_CBS339.97T_LanataDivaricata_BenA_GU981621_xxx Penicillium_lineolatum_CBS188.77T_LanataDivaricata_BenA_GU981620_xxx Penicillium_ludwigii_CBS417.68T_LanataDivaricata_BenA_KF296468_xxx Penicillium_malacosphaerulum_CBS135120T_LanataDivaricata_BenA_JX091524_xxx Penicillium_malacosphaerulum_CBS135121_LanataDivaricata_BenA_JX091525_xxx Penicillium_mariaecrucis_CBS271.83T_LanataDivaricata_BenA_GU981630_xxx Penicillium_meloforme_CBS445.74T_LanataDivaricata_BenA_GU981656_xxx Penicillium_ochrochloron_CBS357.48T_LanataDivaricata_BenA_GU981672_xxx Penicillium_ochrochloron_cuprophilum_CBS133150T_LanataDivaricata_BenA_KC346324_xxx Penicillium_onobense_CBS174.81T_LanataDivaricata_BenA_GU981627_xxx Penicillium_ortum_CBS135669T_LanataDivaricata_BenA_JX091520_xxx Penicillium_ortum_CBS135670_LanataDivaricata_BenA_JX091521_xxx 'Penicillium oxalicum CBS219.30T_LanataDivaricata_BenA_KF296462' Penicillium_paraherquei_CBS338.59T_LanataDivaricata_BenA_KF296465_xxx Penicillium_penarojense_CBS113178T_LanataDivaricata_BenA_GU981646_xxx Penicillium_piscarium_CBS362.48T_LanataDivaricata_BenA_GU981668_xxx Penicillium_pulvillorum_CBS280.39T_LanataDivaricata_BenA_GU981670_xxx Penicillium_pulvillorum_ciegleri_CBS275.83T_LanataDivaricata_BenA_KF296463_xxx Penicillium_raperi_CBS281.58T_LanataDivaricata_BenA_GU981622_xxx Penicillium_reticulisporum_CBS122.68T_LanataDivaricata_BenA_GU981665_xxx Penicillium_reticulisporum_arvense_CBS513.74T_LanataDivaricata_BenA_GU981666_xxx Penicillium_rolfsii_CBS368.48T_LanataDivaricata_BenA_GU981667_xxx Penicillium_simplicissimum_CBS372.48T_LanataDivaricata_BenA_GU981632_xxx Penicillium_singorense_CBS138214T_LanataDivaricata_BenA_KJ775167_xxx Penicillium_skrjabinii_CBS439.75T_LanataDivaricata_BenA_GU981626_xxx Penicillium_skrjabinii_DTO180I3_LanataDivaricata_BenA_JX091529_xxx Penicillium_skrjabinii_NRRL13055_LanataDivaricata_BenA_EU427271_xxx Penicillium_subrubescens_CBS129543_LanataDivaricata_BenA_KC797610_xxx Penicillium_subrubescens_CBS129617_LanataDivaricata_BenA_KC797611_xxx Penicillium_subrubescens_CBS130052_LanataDivaricata_BenA_KC797612_xxx Penicillium_subrubescens_CBS130205_LanataDivaricata_BenA_KC797613_xxx Penicillium_subrubescens_CBS131061_LanataDivaricata_BenA_KC797614_xxx Penicillium_subrubescens_CBS131064_LanataDivaricata_BenA_KC797615_xxx Penicillium_subrubescens_CBS132785T_LanataDivaricata_BenA_KC346327_xxx Penicillium_subrubescens_CBS134204_LanataDivaricata_BenA_KC797617_xxx Penicillium_subrubescens_CBS134205_LanataDivaricata_BenA_KC797618_xxx Penicillium_svalbardense_CBS122416T_LanataDivaricata_BenA_KC346325_xxx Penicillium_svalbardense_DTO117I6_LanataDivaricata_BenA_KC346325_xxx Penicillium_vanderhammenii_CBS126216T_LanataDivaricata_BenA_GU981647_xxx Penicillium_vasconiae_CBS339.79T_LanataDivaricata_BenA_GU981653_xxx Penicillium_wotroi_CBS118171T_LanataDivaricata_BenA_GU981637_xxx Penicillium_zonatum_CBS992.72T_LanataDivaricata_BenA_GU981651_xxx ; END; BEGIN TREES; TITLE 'LanataDivaricata_BI_BenA'; LINK TAXA = Taxa; TREE LanataDivaricata_BI_BenA1 = [&R] ('Penicillium oxalicum CBS219.30T_LanataDivaricata_BenA_KF296462':0.6228678772181283,Penicillium_glabrum_CBS125543T_Aspergilloides_BenA_KM088767_xxx:1.6871552592492,((Penicillium_abidjanum_CBS246.67T_LanataDivaricata_BenA_GU981650_xxx:0.1515967067654559,(Penicillium_daleae_CBS211.28T_LanataDivaricata_BenA_GU981649_xxx:0.04450122690313651,Penicillium_griseopurpureum_CBS406.65T_LanataDivaricata_BenA_KF296467_xxx:0.0916507610128544)0.996:0.08486132996328373,Penicillium_zonatum_CBS992.72T_LanataDivaricata_BenA_GU981651_xxx:0.06455424809099844,((((Penicillium_cf_singorense2_KAS2555_LanataDivaricata_BenA_na_xxx:0.003874054784846272,Penicillium_cf_singorense2_KAS1396_LanataDivaricata_BenA_na_xxx:0.00392390315014221)0.935:0.009437300828973023,Penicillium_cf_singorense2_KAS1392_LanataDivaricata_BenA_na_xxx:0.004112745786770416)1.000:0.05177280033596683,Penicillium_singorense_CBS138214T_LanataDivaricata_BenA_KJ775167_xxx:0.07531478204257379)0.992:0.04865237985733418,(Penicillium_penarojense_CBS113178T_LanataDivaricata_BenA_GU981646_xxx:0.08191941954208584,Penicillium_vanderhammenii_CBS126216T_LanataDivaricata_BenA_GU981647_xxx:0.06545042839079597)1.000:0.04652020606545017)0.981:0.1007476922198429)0.743:0.04995433047574508,(((((Penicillium_annulatum_CBS135123_LanataDivaricata_BenA_JX091516_xxx:0.0181593163306372,(Penicillium_annulatum_CBS135126T_LanataDivaricata_BenA_JX091514_xxx:0.004393662123918291,Penicillium_annulatum_CBS135124_LanataDivaricata_BenA_JX091517_xxx:0.01607584424562761)0.792:0.009665083585928968)0.999:0.1130054561401134,(((((Penicillium_cf_subrubescens_KAS2166_LanataDivaricata_BenA_na_xxx:0.004369232813467948,Penicillium_cf_subrubescens_KAS2169_LanataDivaricata_BenA_na_xxx:0.00394633349568814,Penicillium_cf_subrubescens_KAS2172_LanataDivaricata_BenA_na_xxx:0.004176322354815474,Penicillium_cf_subrubescens_KAS2182_LanataDivaricata_BenA_na_xxx:0.004345084393287526,Penicillium_cf_subrubescens_KAS2170_LanataDivaricata_BenA_na_xxx:0.004329865472950314,Penicillium_cf_subrubescens_KAS2176_LanataDivaricata_BenA_na_xxx:0.004096929725877436,Penicillium_cf_subrubescens_KAS2177_LanataDivaricata_BenA_na_xxx:0.004057286103099026)0.880:0.01042576211120953,Penicillium_cf_subrubescens_KAS2199_LanataDivaricata_BenA_na_xxx:0.004243097110473359,Penicillium_cf_subrubescens_KAS2193_LanataDivaricata_BenA_na_xxx:0.004466574805287719)1.000:0.03227229351061335,((Penicillium_subrubescens_CBS129543_LanataDivaricata_BenA_KC797610_xxx:0.004048880558755198,Penicillium_subrubescens_CBS130205_LanataDivaricata_BenA_KC797613_xxx:0.00432168082967167,Penicillium_subrubescens_CBS131064_LanataDivaricata_BenA_KC797615_xxx:0.004157305627164349,Penicillium_subrubescens_CBS132785T_LanataDivaricata_BenA_KC346327_xxx:0.01012452999557502)0.956:0.01067395543841111,Penicillium_subrubescens_CBS129617_LanataDivaricata_BenA_KC797611_xxx:0.004222690947117727,Penicillium_subrubescens_CBS134204_LanataDivaricata_BenA_KC797617_xxx:0.004085352671642331,Penicillium_subrubescens_CBS134205_LanataDivaricata_BenA_KC797618_xxx:0.004210178289200311,(Penicillium_subrubescens_CBS130052_LanataDivaricata_BenA_KC797612_xxx:0.004209631913323152,Penicillium_subrubescens_CBS131061_LanataDivaricata_BenA_KC797614_xxx:0.004548461149510063)0.992:0.01023784295599186)0.999:0.0848740562446391)0.916:0.02386871593890119,((Penicillium_svalbardense_CBS122416T_LanataDivaricata_BenA_KC346325_xxx:0.004125755916443295,Penicillium_svalbardense_DTO117I6_LanataDivaricata_BenA_KC346325_xxx:0.004113177536430063)1.000:0.09709699639414082,Penicillium_piscarium_CBS362.48T_LanataDivaricata_BenA_GU981668_xxx:0.140613599707292)0.604:0.01589653237352439)0.946:0.02434033875124114,(Penicillium_pulvillorum_CBS280.39T_LanataDivaricata_BenA_GU981670_xxx:0.0042003109942292,Penicillium_pulvillorum_ciegleri_CBS275.83T_LanataDivaricata_BenA_KF296463_xxx:0.004459306746131555)1.000:0.07780294190527577,(Penicillium_ochrochloron_CBS357.48T_LanataDivaricata_BenA_GU981672_xxx:0.004294435949829829,Penicillium_ochrochloron_cuprophilum_CBS133150T_LanataDivaricata_BenA_KC346324_xxx:0.004703586207283634)0.993:0.06647274058297993,Penicillium_rolfsii_CBS368.48T_LanataDivaricata_BenA_GU981667_xxx:0.2220945439133752)0.916:0.04990021643303225)0.909:0.06689411853954089,(Penicillium_cf_vasconiae_KAS1949_DAOM167033_LanataDivaricata_BenA_na_xxx:0.00423336727261761,Penicillium_cf_vasconiae_KAS1951_DAOM167011_LanataDivaricata_BenA_na_xxx:0.004210447959704967)1.000:0.1102323140111449)0.909:0.0602817931883057,Penicillium_vasconiae_CBS339.79T_LanataDivaricata_BenA_GU981653_xxx:0.05094262967840844)0.908:0.08444135039701964,((((Penicillium_araracuaraense_CBS113149T_LanataDivaricata_BenA_GU981642_xxx:0.06979949880588397,Penicillium_wotroi_CBS118171T_LanataDivaricata_BenA_GU981637_xxx:0.06561087572355573)1.000:0.06792948835641849,(Penicillium_cf_araracuaraense_KAS1946_LanataDivaricata_BenA_na_xxx:0.004283280881473337,Penicillium_cf_araracuaraense_KAS2256_LanataDivaricata_BenA_na_xxx:0.003999355252066783,Penicillium_cf_araracuaraense_KAS1947_LanataDivaricata_BenA_na_xxx:0.004062155927397658)1.000:0.07254728580435155)0.521:0.02425210974895526,Penicillium_simplicissimum_CBS372.48T_LanataDivaricata_BenA_GU981632_xxx:0.08880822834313266,(((Penicillium_cf_mariaecrucis2_KAS2145_LanataDivaricata_BenA_na_xxx:0.00417058598913416,Penicillium_cf_mariaecrucis2_KAS2271_LanataDivaricata_BenA_na_xxx:0.004044930876779212,Penicillium_cf_mariaecrucis2_KAS2270_LanataDivaricata_BenA_na_xxx:0.009835115591309338)1.000:0.06528104075450504,Penicillium_mariaecrucis_CBS271.83T_LanataDivaricata_BenA_GU981630_xxx:0.1215858411528335)0.796:0.02081931284608797,(Penicillium_cf_mariaecrucis3_KAS2168T_LanataDivaricata_BenA_na_xxx:0.00412031182501487,Penicillium_cf_mariaecrucis3_KAS2181_LanataDivaricata_BenA_na_xxx:0.003988436308218712)1.000:0.1588189127175007)0.960:0.06419736194397278)0.512:0.02079600340120513,(Penicillium_cf_wotroi_KAS2208_LanataDivaricata_BenA_na_xxx:0.003902306735232603,Penicillium_cf_wotroi_KAS2209_LanataDivaricata_BenA_na_xxx:0.003974006541439892)1.000:0.05662888897909715,(((Penicillium_brasilianum_CBS253.55T_LanataDivaricata_BenA_GU981629_xxx:0.05674624213463684,Penicillium_onobense_CBS174.81T_LanataDivaricata_BenA_GU981627_xxx:0.04359790564454732)0.716:0.01011824609774471,Penicillium_paraherquei_CBS338.59T_LanataDivaricata_BenA_KF296465_xxx:0.06236803455574128)0.913:0.01808549316799839,((Penicillium_skrjabinii_CBS439.75T_LanataDivaricata_BenA_GU981626_xxx:0.00410929721135677,Penicillium_skrjabinii_NRRL13055_LanataDivaricata_BenA_EU427271_xxx:0.004239914964693226)0.996:0.01562476825530362,Penicillium_skrjabinii_DTO180I3_LanataDivaricata_BenA_JX091529_xxx:0.02764252465045739)1.000:0.02890216818893522)1.000:0.1111782653049213)0.954:0.08132262033023438)0.681:0.03137117951868817,(((((Penicillium_caperatum_CBS443.75T_LanataDivaricata_BenA_GU981660_xxx:0.105487203086497,(Penicillium_reticulisporum_CBS122.68T_LanataDivaricata_BenA_GU981665_xxx:0.004442119852654892,Penicillium_reticulisporum_arvense_CBS513.74T_LanataDivaricata_BenA_GU981666_xxx:0.004354366797462682)0.995:0.04603216851060456)0.833:0.02022279668517298,(Penicillium_malacosphaerulum_CBS135120T_LanataDivaricata_BenA_JX091524_xxx:0.004564659714151719,Penicillium_malacosphaerulum_CBS135121_LanataDivaricata_BenA_JX091525_xxx:0.004402929675925005)1.000:0.04586730035301349,(Penicillium_javanicum_CBS341.48T_LanataDivaricata_BenA_GU981657_xxx:0.004485816671061052,Penicillium_javanicum_oligosporum_CBS349.51T_LanataDivaricata_BenA_KF296466_xxx:0.004261556807534908)1.000:0.1268202719547518)0.982:0.02922787403379325,Penicillium_elleniae_CBS118135T_LanataDivaricata_BenA_GU981663_xxx:0.05955331995818421)0.928:0.02997117823075168,(Penicillium_coeruleum_CBS141.45T_LanataDivaricata_BenA_GU981655_xxx:0.02310619059644518,Penicillium_levitum_CBS345.48T_LanataDivaricata_BenA_GU981654_xxx:0.06811594323961566)0.995:0.1415171999174488,((Penicillium_brachycaulon_CBS135127T_LanataDivaricata_BenA_JX091526_xxx:0.1076665149088546,((((Penicillium_cremeogriseum_CBS223.66T_LanataDivaricata_BenA_GU981624_xxx:0.04568943574641329,(Penicillium_ortum_CBS135669T_LanataDivaricata_BenA_JX091520_xxx:0.003811043469744447,Penicillium_ortum_CBS135670_LanataDivaricata_BenA_JX091521_xxx:0.004142734569380988)1.000:0.04177025497600538)0.630:0.02168515489014957,(Penicillium_cluniae_CBS326.89T_LanataDivaricata_BenA_KF296471_xxx:0.03923311583184252,Penicillium_ludwigii_CBS417.68T_LanataDivaricata_BenA_KF296468_xxx:0.03237003383305745,Penicillium_glaucoroseum_NRRL908T_LanataDivaricata_BenA_KF296469_xxx:0.04294624414515391,Penicillium_janthinellum_CBS340.48T_LanataDivaricata_BenA_GU981625_xxx:0.08343942044703648)0.998:0.03585742144053118)0.629:0.01983754608944933,(Penicillium_brefeldianum_CBS235.81T_LanataDivaricata_BenA_GU981623_xxx:0.03154695528179717,Penicillium_limosum_CBS339.97T_LanataDivaricata_BenA_GU981621_xxx:0.08204790761282567)1.000:0.07621692269550434)0.995:0.03455759296324541,(Penicillium_koreense_KACC47721T_LanataDivaricata_BenA_KM000846_xxx:0.07382735957943339,Penicillium_raperi_CBS281.58T_LanataDivaricata_BenA_GU981622_xxx:0.06874312742944463)1.000:0.06014191610104007)0.921:0.03218761355338621)0.947:0.05101516476918804,Penicillium_lineolatum_CBS188.77T_LanataDivaricata_BenA_GU981620_xxx:0.1696867938476649)0.996:0.1153739692499524)0.671:0.03362602384635522,(Penicillium_meloforme_CBS445.74T_LanataDivaricata_BenA_GU981656_xxx:0.08303108031883873,Penicillium_ehrlichii_CBS324.48T_LanataDivaricata_BenA_KF296464_xxx:0.2019170800056948)0.579:0.02066240371259049)0.610:0.07432943332056523)0.976:0.4319425364574311); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr92609] END;