#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 19, 2024; 7:36 GMT

TreeBASE (cc) 1994-2008

Study reference:
Visagie C. 2016. Fifteen new species of Penicillium. Persoonia, 36: 247–280.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S18638]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=29;
        TAXLABELS
            Penicillium_boreae_CBS111717T_Stolkiae_CaM_AF481138
            Penicillium_canariense_CBS111720T_Stolkiae_CaM_AF481137
            Penicillium_cf_canariense_KAS2475T_Stolkiae_CaM_na
            Penicillium_cf_canariense_KAS2476_Stolkiae_CaM_na
            Penicillium_cf_canariense_KAS2477B_Stolkiae_CaM_na
            Penicillium_cf_coffeae_KAS2597T_Charlesia_CaM_na
            Penicillium_charlesii_CBS304.48T_Charlesia_CaM_AY741727
            Penicillium_charlesii_CV0646_Charlesia_CaM_JX141530
            Penicillium_charlesii_CV0744_Charlesia_CaM_JX141531
            Penicillium_charlesii_CV1754_Charlesia_CaM_JX141532
            Penicillium_charlesii_CV1819_Charlesia_CaM_JX141533
            Penicillium_charlesii_CV2006_Charlesia_CaM_JX141534
            Penicillium_coffeae_CBS119387T_Charlesia_CaM_AY741747
            Penicillium_donkii_CBS188.72T_Stolkiae_CaM_AF481136
            Penicillium_fellutanum_CBS229.81T_Charlesia_CaM_AY741753
            Penicillium_fellutanum_CV1936_Charlesia_CaM_JX141535
            Penicillium_fellutanum_NRRL35619_Charlesia_CaM_EF198573
            Penicillium_fellutanum_NRRL35622_Charlesia_CaM_EF198576
            Penicillium_fellutanum_ebenbitarianum_CBS415.69T_Charlesia_CaM_AY741751
            Penicillium_georgiense_CBS132826T_Charlesia_CaM_EF506239
            Penicillium_georgiense_NRRL35507_Charlesia_CaM_EF506238
            Penicillium_georgiense_NRRL35508_Charlesia_CaM_EF506240
            Penicillium_indicum_CBS115.63T_Charlesia_CaM_AY741744
            Penicillium_indicum_gerundense_CBS179.81T_Charlesia_CaM_EU427283
            Penicillium_multicolor_CBS501.73T_Charlesia_CaM_JN799646
            Penicillium_phoeniceum_CBS249.32T_Charlesia_CaM_AY741729
            Penicillium_pullum_CBS331.48T_Stolkiae_CaM_AF481134
            Penicillium_stolkiae_CBS315.67T_Stolkiae_CaM_AF481135
            Penicillium_subarcticum_CBS111719T_Stolkiae_CaM_AF481141
            ;
END;

BEGIN TREES;
      TITLE 'Charlesia_BI_CaM';
      LINK TAXA = Taxa;
      TREE Charlesia_BI_CaM1 = [&R] (Penicillium_charlesii_CBS304.48T_Charlesia_CaM_AY741727:0.003085373,Penicillium_charlesii_CV0646_Charlesia_CaM_JX141530:0.001318029,Penicillium_charlesii_CV0744_Charlesia_CaM_JX141531:0.0013289,((((Penicillium_fellutanum_CBS229.81T_Charlesia_CaM_AY741753:0.001279763,Penicillium_fellutanum_ebenbitarianum_CBS415.69T_Charlesia_CaM_AY741751:0.003320086,Penicillium_fellutanum_NRRL35622_Charlesia_CaM_EF198576:0.001389731,Penicillium_fellutanum_NRRL35619_Charlesia_CaM_EF198573:0.001314225)0.984:0.005202055,Penicillium_fellutanum_CV1936_Charlesia_CaM_JX141535:0.001367522,Penicillium_multicolor_CBS501.73T_Charlesia_CaM_JN799646:0.001374989)0.933:0.01983464,((Penicillium_indicum_CBS115.63T_Charlesia_CaM_AY741744:0.00133299,Penicillium_indicum_gerundense_CBS179.81T_Charlesia_CaM_EU427283:0.001321424)1.000:0.1622885,(Penicillium_coffeae_CBS119387T_Charlesia_CaM_AY741747:0.04615092,Penicillium_phoeniceum_CBS249.32T_Charlesia_CaM_AY741729:0.08247887)1.000:0.1873129,(Penicillium_georgiense_CBS132826T_Charlesia_CaM_EF506239:0.001504421,Penicillium_georgiense_NRRL35507_Charlesia_CaM_EF506238:0.00129831,Penicillium_georgiense_NRRL35508_Charlesia_CaM_EF506240:0.001367221)1.000:0.2888206,Penicillium_cf_coffeae_KAS2597T_Charlesia_CaM_na:0.3013726,((((Penicillium_boreae_CBS111717T_Stolkiae_CaM_AF481138:0.003205728,Penicillium_pullum_CBS331.48T_Stolkiae_CaM_AF481134:0.005152032)0.998:0.01075209,((Penicillium_stolkiae_CBS315.67T_Stolkiae_CaM_AF481135:0.01723685,Penicillium_subarcticum_CBS111719T_Stolkiae_CaM_AF481141:0.01762369)0.795:0.002959522,(Penicillium_cf_canariense_KAS2475T_Stolkiae_CaM_na:0.001224556,Penicillium_cf_canariense_KAS2477B_Stolkiae_CaM_na:0.001299022,Penicillium_cf_canariense_KAS2476_Stolkiae_CaM_na:0.001327243)0.993:0.008830228)0.894:0.00485107)0.953:0.008964015,Penicillium_canariense_CBS111720T_Stolkiae_CaM_AF481137:0.03182286)0.860:0.03467385,Penicillium_donkii_CBS188.72T_Stolkiae_CaM_AF481136:0.02348634)1.000:0.4435161)0.999:0.1299674)0.874:0.02031897,(Penicillium_charlesii_CV2006_Charlesia_CaM_JX141534:0.001281856,Penicillium_charlesii_CV1754_Charlesia_CaM_JX141532:0.001393316,Penicillium_charlesii_CV1819_Charlesia_CaM_JX141533:0.001325688)0.999:0.02016759)0.964:0.008505502);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr92714]


END;