#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 19, 2024; 9:00 GMT

TreeBASE (cc) 1994-2008

Study reference:
Almeida D.A., Gusmao L.F., & Miller A.N. 2016. Taxonomy and molecular phylogeny of
Diatrypaceae (Ascomycota, Xylariales) species from the Brazilian semi-arid region,
including four new species. Mycological Progress, 15(53): 1-27.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S18704]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=45;
        TAXLABELS
            Anthostoma_decipiens_JL567
            Cryptospha_pullma_UCD730SJ
            Cryptovalsa_ampelina_A001
            Cryptovalsa_rabenhorstii_WA08CB
            Diatrype_AD53
            Diatrype_brunneospora_CNP01
            Diatrype_bullata_UCDDCh400
            Diatrype_flavovirens_CBS27287
            Diatrype_oregonensis_DPL200
            Diatrype_stigma_DCash200
            Diatrype_whitmanensis_CDB011
            Diatrypella_atlantica_HUEFS131233
            Diatrypella_atlantica_HUEFS136873
            Diatrypella_atlantica_HUEFS155113
            Diatrypella_atlantica_HUEFS192148
            Diatrypella_atlantica_HUEFS194228
            Diatrypella_flava_HUEFS155112
            Diatrypella_flava_HUEFS155114
            Diatrypella_flava_HUEFS155116
            Diatrypella_flava_HUEFS192127
            Diatrypella_flava_HUEFS192141
            Diatrypella_flava_HUEFS192153
            Diatrypella_verruca_DHB500
            Diatrypella_vulgaris_HVPT01
            Eutypa_armeniacae_ATCC28120
            Eutypa_astroidea_CBS29287
            Eutypa_laevata_CBS29187
            Eutypa_lata_DCA900
            Eutypa_lata_var._aceri_CBS29087
            Eutypa_lejoplaca_CBS24887
            Eutypa_leptoplaca_CBS286.87
            Eutypa_maura_CBS_219.87
            Eutypa_microasca_BAFC_51550
            Eutypa_sparsa_3802_3
            Eutypa_tetragona_CBS284.87
            Eutypella_AD48
            Eutypella_australiensis_CNP03
            Eutypella_citricola_ADEL100
            Eutypella_citricola_HUEFS194248
            Eutypella_cryptovalsoidea_HVFIG02
            Eutypella_microtheca_ADEL200
            Eutypella_vitis_MSUELM13
            Nemania_serpens_N112C
            Peroneutypa_scoparia_DFMAL100
            Xylaria_multiplex_PR112
            ;
END;

BEGIN TREES;
      TITLE 'Diatrypaceae Phylogram of the maximum likelihood analyses generated based on a combined dataset of ITS nrDNA and ß-tubulin sequences';
      LINK TAXA = Taxa;
      TREE Fig._3 = [&R] ((Xylaria_multiplex_PR112:0.24086937259580443,Nemania_serpens_N112C:0.13363802132718666):0.2566697883492508,(((Anthostoma_decipiens_JL567:0.18967516047750146,(Peroneutypa_scoparia_DFMAL100:0.14776691753523122,Eutypa_microasca_BAFC_51550:0.14503873333231593):0.14606202336916227):0.0100244635628573,(Eutypella_australiensis_CNP03:0.13833872491127255,((Eutypella_vitis_MSUELM13:0.02205045561565106,(Eutypella_citricola_HUEFS194248:0.0013810176018189324,(Eutypella_citricola_ADEL100:1.00000050002909E-6,Eutypella_AD48:0.0013813452028840678):1.00000050002909E-6):0.026174034991360198):0.034045528955215856,((Eutypella_cryptovalsoidea_HVFIG02:0.033459949402926466,Cryptovalsa_rabenhorstii_WA08CB:0.02880562491106458):0.023960693687624247,(Eutypella_microtheca_ADEL200:1.00000050002909E-6,Diatrype_AD53:1.00000050002909E-6):0.01601320750185949):0.06139512125031535):0.02145308928524221):0.058708163317429486):0.01748941207567358,(Cryptovalsa_ampelina_A001:0.11337074172705078,(((Diatrype_bullata_UCDDCh400:0.02470158811909274,Diatrype_stigma_DCash200:0.016215838763844918):0.08515684141968749,((Eutypa_leptoplaca_CBS286.87:0.011266947519944837,Eutypa_tetragona_CBS284.87:0.02574183383295864):0.01822254789801364,(Eutypa_maura_CBS_219.87:0.03964708903188953,(Eutypa_lejoplaca_CBS24887:0.023473276232907268,(Eutypa_sparsa_3802_3:0.034024954959466676,Eutypa_astroidea_CBS29287:0.03459887725164995):0.0045926986822506745):0.004146942232532974):0.022326629038365138):0.01884088414525502):0.01498527573316251,(Cryptospha_pullma_UCD730SJ:0.08997579253910606,((Diatrype_flavovirens_CBS27287:0.044118779996877244,(Diatrype_whitmanensis_CDB011:0.045236200097629166,((Eutypa_laevata_CBS29187:0.015784648648793788,Eutypa_lata_var._aceri_CBS29087:0.013001801318851739):0.012117222916021275,(Eutypa_lata_DCA900:0.0016828606531246112,Eutypa_armeniacae_ATCC28120:9.934971245738773E-4):0.015137654623083635):0.036430871990188365):0.00750013872713909):0.008763315392478339,(Diatrype_brunneospora_CNP01:0.08256296618455668,(((Diatrypella_flava_HUEFS155114:1.00000050002909E-6,Diatrypella_flava_HUEFS155112:1.00000050002909E-6):0.001214635226427436,(Diatrypella_flava_HUEFS192127:0.00121472404481783,(Diatrypella_flava_HUEFS155116:1.00000050002909E-6,(Diatrypella_flava_HUEFS192141:1.00000050002909E-6,Diatrypella_flava_HUEFS192153:1.00000050002909E-6):1.00000050002909E-6):1.00000050002909E-6):1.00000050002909E-6):0.03539660707975257,((Diatrypella_verruca_DHB500:0.01235682371818076,Diatrype_oregonensis_DPL200:0.010134763462821179):0.020373301936468833,(Diatrypella_vulgaris_HVPT01:0.011828610097134741,((Diatrypella_atlantica_HUEFS192148:0.0012426258310881877,Diatrypella_atlantica_HUEFS155113:1.00000050002909E-6):0.008524014026494702,(Diatrypella_atlantica_HUEFS131233:1.00000050002909E-6,(Diatrypella_atlantica_HUEFS136873:0.004995724096405302,Diatrypella_atlantica_HUEFS194228:1.00000050002909E-6):1.00000050002909E-6):0.002840236436903216):0.007776515552730092):0.01657213627473388):0.020992874722112708):0.021567994053968014):0.04424790380906571):0.015034579876559758):1.00000050002909E-6):0.04000432285414075):0.009469066327296294):0.2566697883492508);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr93171]


END;