#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 18, 2024; 23:20 GMT

TreeBASE (cc) 1994-2008

Study reference:
Suzuki M., Segawa T., Mori H., Akiyoshi A., Ootsuki R., Kurihara A., Kitayama T.,
Abe T., Kogame K., & Nozaki H. 2016. Next-generation sequencing of an 88-year-old
specimen of the poorly known species Liagora japonica (Nemaliales, Rhodophyta)
supports the recognition of Otohimella gen. nov. PLOS One, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S18829]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=19;
        TAXLABELS
            Acrochaetium_secundatum_AF079784
            Ahnfeltia_plicata_Z14139
            Akalaphycus_liagoroides_KC157584
            Balbiania_investiens_AF132294
            Ballia_callitricha_AF236791
            Batrachospermum_gelatinosum_AF026045
            Colaconema_daviesii_AF079788
            Corallina_officinalis_FM180104
            Entwisleia_bella_KC157586
            Leptofauchea_leptophylla_AB690302
            Liagora_japonica_LC066525_LC066526
            Liagora_japonica_LC066531_LC066532
            Nemalion_multifidum_KC157579
            Nothogenia_fastigiata_KC157581
            Palmaria_palmata_Z14142
            Pihiella_liagoraciphila_AY301992
            Rhodachlya_madagascarensis_EU262260
            Sporolithon_ptychoides_DQ629014
            Thorea_hispida_KF746958
            ;
END;

BEGIN TREES;
      TITLE Liagora_japonica_18S_rRNA_gene;
      LINK TAXA = Taxa;
      TREE Imported_tree_1 = [&R] ((Leptofauchea_leptophylla_AB690302:0.116237,(Ahnfeltia_plicata_Z14139:0.0270802,Pihiella_liagoraciphila_AY301992:0.0785109)1.000:0.0620825)0.948:0.0215221,((Corallina_officinalis_FM180104:0.0754756,Sporolithon_ptychoides_DQ629014:0.0344209)1.000:0.0667171,(Batrachospermum_gelatinosum_AF026045:0.0109415,((Ballia_callitricha_AF236791:0.0873407,Balbiania_investiens_AF132294:0.00807128,Rhodachlya_madagascarensis_EU262260:0.0293981,Thorea_hispida_KF746958:0.0401379)0.572:0.00254729,(Acrochaetium_secundatum_AF079784:0.00319491,Palmaria_palmata_Z14142:0.00573612,(Colaconema_daviesii_AF079788:0.0119838,Entwisleia_bella_KC157586:0.00331576)0.924:0.00294826,(Nothogenia_fastigiata_KC157581:0.0161364,(Nemalion_multifidum_KC157579:0.00803001,(Liagora_japonica_LC066525_LC066526:0.00139768,Liagora_japonica_LC066531_LC066532:5.67359E-4,Akalaphycus_liagoroides_KC157584:0.00224603)0.979:0.00262587)1.000:0.00488532)0.989:0.00588362)0.750:0.00352221)0.837:0.00852799)0.972:0.0223265):0.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr93604]


END;