#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 18, 2024; 17:48 GMT TreeBASE (cc) 1994-2008 Study reference: Castellanos C., Steeves R.A., Bruneau A., & Lewis G.P. 2016. A settled sub-family for the Orphan tree: The phylogenetic position of the endemic Colombian genus Orphanodendron in the Leguminosae. Brittonia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S18227] BEGIN TAXA; TITLE Untitled_Block_of_Taxa; DIMENSIONS NTAX=94; TAXLABELS Ammodendron_conollyi_EF457705 Ammothamnus_lehmannii_EF457706 Anagyris_foetida_AF330637 Baptisia_australis_AY091572 Bolusanthus_speciosus_EF457708 Bowdichia_nitida_JX124477 Bowdichia_nitida_JX124478 Bowdichia_nitida_JX124479 Bowdichia_virgilioides_EF457709 Bowdichia_virgilioides_JX124475 Bowdichia_virgilioides_JX124476 Brongniartia_magnibracteata_AF287638 Cadia_purpurea_EF457710 Camoensia_brevicalyx_KT718820 Camoensia_scandens_KT718821 Camoensia_scandens_KT718822 Cyclolobium_brasiliense_AF287637 Cyclolobium_nutans_AF467041 Dicraeopetalum_mahafaliense_EF457716 Diplotropis_aff__JX124487 Diplotropis_ferruginea_JX124482 Diplotropis_incexis_JX124480 Diplotropis_incexis_JX124485 Diplotropis_incexis_JX124486 Diplotropis_martiusii_AY553711 Diplotropis_martiusii_JX124481 Diplotropis_martiusii_JX124484 Diplotropis_martiusii_JX124506 Diplotropis_purpurea_JX124507 Diplotropis_triloba_JX124483 Genista_monspessulana_JF338495 Guianodendron_praeclarum_JX124488 Guianodendron_praeclarum_JX124489 Hovea_elliptica_AF287640 Leptolobium_bijugum_JX124490 Leptolobium_bijugum_JX124491 Leptolobium_bijugum_JX124492 Leptolobium_brachystachyum_JX124493 Leptolobium_brachystachyum_JX124494 Leptolobium_brachystachyum_JX124495 Leptolobium_brachystachyum_JX124497 Leptolobium_dasycarpum_JX124496 Leptolobium_dasycarpum_JX124504 Leptolobium_dasycarpum_JX124512 Leptolobium_dasycarpum_JX124514 Leptolobium_dasycarpum_JX124515 Leptolobium_dasycarpum_JX124516 Leptolobium_dasycarpum_JX124517 Leptolobium_dasycarpum_JX124518 Leptolobium_dasycarpum_JX124519 Leptolobium_elegans_JX124505 Leptolobium_elegans_JX124509 Leptolobium_elegans_JX124510 Leptolobium_nitens_JX124511 Leptolobium_nitens_JX124513 Leptolobium_panamense_JX124498 Leptolobium_parvifolium_JX124499 Leptolobium_sp__JX124500 Leptolobium_sp__JX124501 Leptolobium_tenuifolium_JX124502 Leptolobium_tenuifolium_JX124503 Lupinus_argenteus_DQ524197 Maackia_chinensis_EF457721 Neoharmsia_madagascariensis_EF457723 Neoharmsia_sp__EF457722 Ormosia_amazonica_EF457724 Orphanodendron_bernalii_KT718823 Orphanodendron_bernalii_KT718824 Pericopsis_sp__EF457725 Piptanthus_leiocarpus_AY091569 Piptanthus_tomentosus_AY091570 Platycelyphium_voense_EF457726 Poecilanthe_falcata_AF467492 Poecilanthe_parviflora_AF187089 Sophora_davidii_AF467496 Sophora_flavescens_AF123452 Sophora_prostrata_AJ409922 Sophora_raivavaeensis_AY056080 Sophora_toromiro_AJ409921 Staminodianthus_duckei_JX124508 Templetonia_retusa_AF287636 Templetonia_sulcata_AF287635 Thermopsis_alpina_AF123447 Thermopsis_chinensis_AF123443 Thermopsis_divaricarpa_AY091575 Thermopsis_fabacea_AY091573 Thermopsis_inflata_AF123451 Thermopsis_licentiana_AF123449 Thermopsis_macrophylla_AF123450 Thermopsis_montana_AF007468 Thermopsis_montana_AY091574 Thermopsis_smithiana_AF123445 Thermopsis_turkestanica_AF123446 Thermopsis_villosa_AF123444 ; END; BEGIN TREES; TITLE 'Orphanodendron ITS_Orphanodendron 94 taxa Bayesian analysis'; LINK TAXA = Untitled_Block_of_Taxa; TREE 'Fig. 3-B' = [&R] (Ormosia_amazonica_EF457724:0.08712295792381126,(((Brongniartia_magnibracteata_AF287638:0.03882562132301571,(Hovea_elliptica_AF287640:0.01642101091974102,Templetonia_retusa_AF287636:0.02219534484786569,Templetonia_sulcata_AF287635:0.01246844052035366):0.005562133812330297):0.03136892629074439,(Cyclolobium_brasiliense_AF287637:0.006950229136186388,Cyclolobium_nutans_AF467041:0.01636637527654963):0.07670898138481454):0.01105682871132032,(Poecilanthe_falcata_AF467492:0.03001526355369351,Poecilanthe_parviflora_AF187089:0.04556617933382694):0.0704564945518994):0.04416843436299273,((((((((((Ammodendron_conollyi_EF457705:0.0544881798765388,Ammothamnus_lehmannii_EF457706:0.03739704643420368):0.03197621690169192,Sophora_davidii_AF467496:0.05008497250230649):0.007430436688859441,(Sophora_prostrata_AJ409922:0.005129788815010048,Sophora_raivavaeensis_AY056080:0.001027825497078471,Sophora_toromiro_AJ409921:9.566816872964955E-4):0.01492410476846737):0.01238798476894966,Sophora_flavescens_AF123452:0.02150775198534035):0.04122975970112246,((((Anagyris_foetida_AF330637:0.01445167067278948,(Thermopsis_alpina_AF123447:0.002731139115996162,Thermopsis_turkestanica_AF123446:0.003034798635694119):0.007819327706600931):0.003679806205498868,((Piptanthus_leiocarpus_AY091569:9.241522058156017E-4,Piptanthus_tomentosus_AY091570:0.002520369875493894):0.007489193118242442,Thermopsis_licentiana_AF123449:0.009302082749925654):0.002390365486398512,Thermopsis_smithiana_AF123445:0.006054796109187906):0.007085960342579724,Thermopsis_inflata_AF123451:0.01537290336833685):0.01899601622351352,((Baptisia_australis_AY091572:0.01396850739105579,Thermopsis_chinensis_AF123443:0.01258995649637233):0.001738892705031563,((Thermopsis_divaricarpa_AY091575:0.002279376322822664,Thermopsis_villosa_AF123444:0.003545911427861554):0.005987422142666453,(Thermopsis_fabacea_AY091573:0.00228214167465953,Thermopsis_montana_AF007468:0.003584202525872914,Thermopsis_montana_AY091574:9.469806734618806E-4):0.003647369887305458,Thermopsis_macrophylla_AF123450:0.007474089435431373):0.003840786258078629):0.02099889884752298):0.01765104308650076):0.009928442335064635,Maackia_chinensis_EF457721:0.08583641376180899):0.01601250191036101,Cadia_purpurea_EF457710:0.08431657144301895,(Genista_monspessulana_JF338495:0.02591289531951948,Lupinus_argenteus_DQ524197:0.02761479485810206):0.02217846572437446):0.01065791594759958,(Bolusanthus_speciosus_EF457708:0.03699636832360288,((Dicraeopetalum_mahafaliense_EF457716:0.01355640913868736,(Neoharmsia_madagascariensis_EF457723:0.001319352990032224,Neoharmsia_sp__EF457722:0.006782989285472199):0.00742167148158595):0.01023720129859339,Platycelyphium_voense_EF457726:0.1244891740673964):0.0108746143149836):0.03059019050486638):0.0163512872982288,((Camoensia_brevicalyx_KT718820:0.01924059619011344,(Camoensia_scandens_KT718821:0.001479156228345147,Camoensia_scandens_KT718822:0.001636746483885952):0.01151858585252781):0.1178811618869966,Pericopsis_sp__EF457725:0.1025246831379329):0.0157008704116875):0.01490511451864215,(((((Bowdichia_nitida_JX124477:0.001090734855692789,Bowdichia_virgilioides_EF457709:0.00262889823185978,Bowdichia_virgilioides_JX124475:0.003758440231567925):0.002419786244428059,(Bowdichia_nitida_JX124478:0.001105591871597273,Bowdichia_nitida_JX124479:0.001067410773494309):0.002483671263196217,Bowdichia_virgilioides_JX124476:0.0025964075282131):0.05125334984141013,((((Leptolobium_bijugum_JX124490:0.001017929019768202,Leptolobium_bijugum_JX124491:0.001044861740915026):0.001855045337467489,Leptolobium_bijugum_JX124492:0.002096676794483879):0.01296484889408296,((Leptolobium_brachystachyum_JX124493:0.001027785804202919,Leptolobium_brachystachyum_JX124494:0.001028386881601075,Leptolobium_brachystachyum_JX124497:0.001023489593909505):0.006926815038426084,Leptolobium_brachystachyum_JX124495:0.007469883561298476):0.005668279816291803):0.009211440025128121,(((((Leptolobium_dasycarpum_JX124496:0.001088974590142335,Leptolobium_dasycarpum_JX124504:0.001077017351575278,Leptolobium_dasycarpum_JX124512:0.002584464938621907,Leptolobium_dasycarpum_JX124514:0.001061093800888638,Leptolobium_dasycarpum_JX124515:0.001107332178272691,Leptolobium_dasycarpum_JX124516:0.001073815928132751,Leptolobium_dasycarpum_JX124517:0.001083023692048014,Leptolobium_dasycarpum_JX124518:0.001049065750006949,Leptolobium_dasycarpum_JX124519:0.00105868079023892,Leptolobium_parvifolium_JX124499:0.002612332203273462):0.002410972609123225,(Leptolobium_elegans_JX124505:0.001114151774800902,Leptolobium_elegans_JX124509:0.002616186952157479,Leptolobium_elegans_JX124510:0.001049682823743591):0.007849320860370074):0.00551019864791099,(Leptolobium_sp__JX124500:0.001135983482315097,Leptolobium_sp__JX124501:0.00118255514180512,(Leptolobium_tenuifolium_JX124502:0.001135644806379229,Leptolobium_tenuifolium_JX124503:0.001147694615473861):0.002708039213617592):0.0116158405281776):0.005564600075735686,Leptolobium_panamense_JX124498:0.01526450554384475):0.01705138291366018,(Leptolobium_nitens_JX124511:0.001081091631487465,Leptolobium_nitens_JX124513:0.001063507368415569):0.01816603039308017):0.04622974743483729):0.01151652573293046):0.0392446465724435,((((Diplotropis_aff__JX124487:9.854546461864873E-4,Diplotropis_ferruginea_JX124482:9.93381098408761E-4,Diplotropis_incexis_JX124480:0.001010668679654339,Diplotropis_incexis_JX124485:9.97454641392464E-4,Diplotropis_incexis_JX124486:0.001010121436692542):0.009215530399190834,((Diplotropis_martiusii_JX124506:0.004120201713795748,Diplotropis_triloba_JX124483:0.002595751093718368):0.009143223515368554,Diplotropis_purpurea_JX124507:0.0108574961684405):0.003763894215487849):0.009671091588425815,(Diplotropis_martiusii_AY553711:0.00105793859007102,Diplotropis_martiusii_JX124481:0.009879558986080814,Diplotropis_martiusii_JX124484:0.001010999673823689):0.0298683525093159):0.04011764384191782,((Guianodendron_praeclarum_JX124488:0.001375418010283956,Guianodendron_praeclarum_JX124489:0.003471202427452077):0.02127562122578653,Staminodianthus_duckei_JX124508:0.02501031646732431):0.02971721145755089):0.00820070194992653):0.04619733388278244,(Orphanodendron_bernalii_KT718823:0.01725932444753947,Orphanodendron_bernalii_KT718824:0.02423244434685646):0.0644606886012403):0.0322898530721168):0.01448776400155415); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr94196] END;