#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 12, 2024; 4:46 GMT

TreeBASE (cc) 1994-2008

Study reference:
Nagy L., Walther G., Házi J., Vágvölgyi C., & Papp T. 2010. Understanding the Evolutionary
Processes of Fungal Fruiting Bodies: Correlated Evolution and Divergence
Times in the Psathyrellaceae. Systematic Biology, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S10613]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=41;
        TAXLABELS
            Agaricus_bisporus_AFTOLID448
            'Auricularia auricula-judae GEL5093'
            Boletus_appendiculatus_BAP1
            Chlorophyllum_agaricoides_AFTOLID440
            Coprinellus_disseminatus_NL2337_71
            Coprinellus_heptemerus_NL2144_68
            Coprinellus_hiascens_NL2536_88
            Coprinellus_rufopruinatus_NL1939_157
            Coprinopsis_goudensis_NL4139_195
            Coprinopsis_lagopus_NL2493_193
            Coprinopsis_marcescibilis_NL0629_93
            Coprinopsis_picacea_NL3033_174
            Coprinopsis_pseudonivea_NL2340_72
            Coprinus_comatus_AFTOLID626
            Coprinus_patouillardii_NL1684_40
            Coprinus_patouillardii_NL1685_39
            Coprinus_patouillardii_NL1687_41
            Coprinus_patouillardii_NL1695_42
            Entoloma_sinuatum_AFTOLID524
            Hygrophorus_eburneus_US97138
            Inocybe_mixtilis_TM03464
            Lacrymaria_pyrotricha_CBS573.79
            Lepista_nebularis_AFTOLID1495
            Mallocybe_dulcamara_AFTOLID482
            Marasmius_oreades_AFTOLID1525
            Marasmius_rotula_AFTOLID1505
            Mycena_amicta_AFTOLID_1908
            Mycena_galericulata
            Parasola_auricoma_NL0087_36
            Parasola_conopilus_NL0285_35
            Parasola_misera_NL0667_52
            Parasola_plicatilis_NL0295_5
            Psathyrella_badiophylla_NL2347_87
            Psathyrella_bipellis_NL0638_162
            Psathyrella_candolleana_NL2937_169
            Psathyrella_fatua_NL0603_288
            Psathyrella_panaeoloides_NL2537_91
            Psathyrella_piluliformis_NL2936_168
            Psathyrella_spadicea_NL3996_199L
            Puccinia_graminis_ECS
            Ustilago_tritici_AFTOLID1398
            ;
END;

BEGIN TREES;
      TITLE 'Maximum clade credibility Chronogram (LSU)';
      LINK TAXA = Taxa;
      TREE TREE1 = [&R] ((Puccinia_graminis_ECS:502.169778518029,Ustilago_tritici_AFTOLID1398:502.169778518029):240.63739895189934,((Boletus_appendiculatus_BAP1:364.1420791378785,(Hygrophorus_eburneus_US97138:299.73973915180505,((((Chlorophyllum_agaricoides_AFTOLID440:48.56395980094357,Agaricus_bisporus_AFTOLID448:48.56395980094357):43.23231532160903,Coprinus_comatus_AFTOLID626:91.7962751225526):128.33342732218873,(Inocybe_mixtilis_TM03464:108.37122124756667,Mallocybe_dulcamara_AFTOLID482:108.37122124756667):111.75848119717466):7.765436168726609,(((Mycena_amicta_AFTOLID_1908:134.9075792348117,Mycena_galericulata:134.9075792348117):76.55943585969692,((Marasmius_oreades_AFTOLID1525:55.927227404136666,Marasmius_rotula_AFTOLID1505:55.927227404136666):152.78584587656576,Lepista_nebularis_AFTOLID1495:208.71307328070242):2.7539418138061933):8.270245393486078,((((Lacrymaria_pyrotricha_CBS573.79:57.595328722232466,Psathyrella_spadicea_NL3996_199L:57.595328722232466):105.8289553482546,((Psathyrella_bipellis_NL0638_162:122.19151397345422,((((Coprinus_patouillardii_NL1695_42:32.41887572511518,Coprinus_patouillardii_NL1685_39:32.41887572511518):17.29078995316818,(Coprinus_patouillardii_NL1684_40:13.745345264351274,Coprinus_patouillardii_NL1687_41:13.745345264351274):35.964320413932086):44.32122568030246,(Psathyrella_panaeoloides_NL2537_91:87.23316572551221,Psathyrella_piluliformis_NL2936_168:87.23316572551221):6.797725633073611):18.900414887484928,Psathyrella_fatua_NL0603_288:112.93130624607075):9.260207727383474):18.912089403062197,((Psathyrella_candolleana_NL2937_169:4.327884944489447,Psathyrella_badiophylla_NL2347_87:4.327884944489447):75.79694262291716,(((Coprinellus_rufopruinatus_NL1939_157:19.021512536067327,Coprinellus_disseminatus_NL2337_71:19.021512536067327):5.915681330242059,Coprinellus_hiascens_NL2536_88:24.937193866309386):22.301141693682887,Coprinellus_heptemerus_NL2144_68:47.23833555999227):32.886492007414326):60.97877580910982):22.320680693970644):15.195219180683921,(((Parasola_conopilus_NL0285_35:33.72005821848313,Parasola_auricoma_NL0087_36:33.72005821848313):55.550481912622374,(Parasola_plicatilis_NL0295_5:45.161737244526236,Parasola_misera_NL0667_52:45.161737244526236):44.10880288657927):88.03106672118362,((Coprinopsis_marcescibilis_NL0629_93:66.87595822563665,Coprinopsis_pseudonivea_NL2340_72:66.87595822563665):51.80751568546388,(Coprinopsis_picacea_NL3033_174:98.6902994931987,(Coprinopsis_lagopus_NL2493_193:70.78809366152268,Coprinopsis_goudensis_NL4139_195:70.78809366152268):27.902205831676014):19.99317441790184):58.61813294118859):1.3178963988818566):32.221569735319434,Entoloma_sinuatum_AFTOLID524:210.84107298649042):8.896187501504272):8.157878125473246):71.84460053833712):64.40233998607346):95.25183440738454,'Auricularia auricula-judae GEL5093':459.39391354526305):283.4132639246653);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr9871]


END;